Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2273 ATGCAGCACATGAATCCCTGTCTGGGGAAGGCACGTGATTTTCTCAAAAAAGAAACAGAGGGAACATCGACAATAAAAGATGAATTTTCATACAAAGAGGAGCTGTTAAGTTTGATGAGGATAAGGGATTTTATAAGCCTGTTGTTGACTTACCCAGTCAAATTCGAAGAGGAAGGTATATTAAAGGCTTGGACTAATGCATTTTCTGAATGGAAAGCACAGTTATTGTCAAATGATGACGATGCAATGGTTAAAAAACCATGGCGGGTATTGACCGAGAGGGCACTAACATTTATCGAAGGGCTCGTGCCAGTGGAAATAACGAGTCAAATAAAACGTGGGGAGAGATACATCTTCAACCATAATTATGCAGTACCAGAATCTGTTCGTCATTTAAGCAGTGATCTCGCAGTAGAGCAACTGATTCAAACTTTGTTTTCTGGAGATGATTATGCACGCAGCATGCGCCATGTGAGGCTGTCAACCAGAAATTTTGCTGAAAAAATGGATGTGGTGAACAAAATAGCGCAAGCCTTAGAAGACAAGCACCACAGGTTTGGAATTGATAAGGATTTTCCTAGAGCCCTGTGGATCTATGCCTCAACATATGAGAATGAGAGTAATGCAGAGGATCGAATTCAAGAAGAGATCAGTTTGATGATGACAGAAGAGATGGAAAGCAAAAGAAATTTGGTGATTCTAGTAGACAGAGAAGGTGAGAAAAAGCTAGACCTAGACCCCCAAAAAATGTGTTTTCCCCCTGGAATTGTGGTGTGGATAACAACTGAAGAGGAGGGTAATGAACTTACGAATACAGTCACATGCATGATGGATTTGAATATCAGGACCCAGGATCATCTATTGCCTTGGGAAGTCTCCTGTTACTATGTGGGTAGAATCACAAGCAGATTTTCATCAGGGATCATTCCCTTTTTGGCATGTGAAATAGTTGAGCTATGTGGTGGCCATCTTCTTGCCATTGTTCTTGTAGCTAAGTCTCTAAAGAATGTGGAAAATCTTCAACAATGGGAACGTGCCCTCCAAAAATTAGGGAATCCTTGCTATGATTATATTTACCATTGGAGTGATCGAATTGGCATTAGAAGAGTAATGGTCAATGCATTCGTATATTCTGTTTGGGAAGGCATTAACAAGACACAAAAGCTTTGCCTTGAACTCAGTTTGTTTGTTGACAAAATCAAAATTGGGGTGCCAAGTGAGACCTTGATGTTTAATTGGATTAGTACTGAATCAGCACACGTACAGGAAACGGCACAGCCTTTCTTCACAACTGATTCAGATGATGATGAATTAAAATCCACAAAAGAAGCAGATAATCACATGAGAGAGTTTCTGGATCGTTCTATCTTGTTGCAATGTGAAGGTAGCAGCAATGTGCGTTTGCCGATAGAAGTCTATAATATAATAAAATGGTTACACATCTTCAATCCTTCCATCATAAGGTGTGGTGCATCAGCATTGATAGAGCTACCCTACATTGGACGATGGCGTGATCTTATTAGAATTGAATTGATGGACAACAAAATATGCGAGCTACCACTATCCCCAGATTGCCCCAAACTCAAAGTGTTATTGTTGCAAGGCAACGTTGATTTGATGGATATCCCAGACTCATTTTTCGACCACATGCCTCTGCTTCTATACTTGGACTTATCCAACACTAGTGTAAGGAATTTGCCTCCCTCTATCTCCAAATTGACAGAGCTTAAGAAACTTTATCTCAGAGGTTGTGATCTCTTTATGGAACTTTCACCAAGAATTGGACAACTGAAAAAGCTTGAGGAGCTTGATCTTGATGGGACTTTGATAACATATCTGCCAAAAGAGATTCGAGAATTGATCAACTTGCAAAGGTTGAACCTCTTCTTTGATCGGGAACTTCGTCATGAAAAAGGAAGCAAGCAAATTTACAAGTCAACAATTATTCCTCCGGGAATAATATCAAATCTTACTCTGTTGAACTACTTAAGTATCAATGTTGATCCCGAAGATGAGCGATGGAATGAAAATGTTACTAACATTCTAGTTGAAATTTTTGAATTGGAGAGGTTGGAGACGGTCAATATATATATCCCAAAGACTGATTTATTGGAGCTCATACCTGCACACAAACCAATTGATTTTAGATTGGTAGTTGGTCATCACATGCGGCGTTTCATATCGCGTGTAACACCCAAAGAGGAGGAAAAATTTAAACAATGTGACCGTAGTTTAAAATTTGTGAATGGCGAAAATGTACCAAATAGAGTGAAAAAGAATCTTGGACGATTCAGGGCTTTATACTTGGACCGACATATGACAATCAAGAGTCTATCTGAATTTGGTTTGAAGAATTTACACAGGTTGCAAGTATGCTTGTTGGGGGAATGTAATGAAATGGAAACAATCGTTGATGGAAGTTACTCGTACGATGGATATGCACTTCCAAATTTGGAGTTTCTGAGTGTATTTTATATGAAGAGTTTAACAAGTATTTACAAAGGGCCTCCTCGAATGGATCCTTCCTTTTTACATTCCTTGAAGTTTATGGCACTGCACACTTGTCCCATGTTAACTACCATCTTCTCCTTAGATTTTCTTGACAACCTTTCCTTATTGGAGGAGCTCATTGTCGTAGACTGTCCAAAAGTTACTACTCTGATTAGTTATAACTCAATAAAGCATGTCACACGTGTTTTCCTTCCTAGGCTGAGAAATATATCACTTCTCTATCTTCCTGAATTGGTCAGTATTTTTAATGGATTGCATGTTGGAGGGGCTTTGGAAAAAATGGGATTTTATTATTGCCCAAAACTCCGAAGTCTTTCAAAGACGGAGTTGTCAAGCAAATGTTTGACAATCATCAAAGGAGAAAATAGGTGGTGGAAGTCATTAAAATGGAAAGAGGCTGAATGGGGTGCTGTAGGTAGGCCTAATTTTCTTGATCTGATCTTTTCCCCAATAAATGATGATACTGACATAATGACCCAATTAGCTACACGTAACCACGAAGACCGGGGTTCAAAATCCATGGCATGCCAAACAAAGCAGAAAATCCCAGAAACCCAGGAAGAGGTCTTGAATTCTACTAAGCAGGCCTTCGAATTGGTACCAAAGCTCCAGAAGTTTGATGTGATAGTCGTACCTGAAAATAATATGGTAAGTGGTTGTGGGGATGTGGAAGGTTCAGATAGATCAACGGTGCCTGAAGGAGAAATGCAAGGAATAGAATCATCACCCTCGCGACCAAGCAAACGCAAGAATAATGATGAGGAGAGAAAGATATTGGTTTGCGCACCGGTTGGAAGCACAGAGATACCTCCGGAGGATGGTTTCCCTTGGAGAAAATATGGCCAAAAACAGATACTTGGTTACAAGTTCCCAAGGAACTACTACAGGTGCATCTACCGATATAAATGTGAGTGTCTAGCCCGGAAGCTGGTACAACGACTTGACGATGATCCTAACATGTTTGAAGTAACATACCGAGGTGAACATACCTGTCACGCGTTATCAACATCAGCATCATTTCCATTAATTACCACAAAGTTAGGTAATATCTCAAAGGACATGACTCAAACTCAAAGCACCAGTTCTCAAGAACCATTTAAGAGAGATTGTCCACAGCAACAGTGA 3636 0.3985 MQHMNPCLGKARDFLKKETEGTSTIKDEFSYKEELLSLMRIRDFISLLLTYPVKFEEEGILKAWTNAFSEWKAQLLSNDDDAMVKKPWRVLTERALTFIEGLVPVEITSQIKRGERYIFNHNYAVPESVRHLSSDLAVEQLIQTLFSGDDYARSMRHVRLSTRNFAEKMDVVNKIAQALEDKHHRFGIDKDFPRALWIYASTYENESNAEDRIQEEISLMMTEEMESKRNLVILVDREGEKKLDLDPQKMCFPPGIVVWITTEEEGNELTNTVTCMMDLNIRTQDHLLPWEVSCYYVGRITSRFSSGIIPFLACEIVELCGGHLLAIVLVAKSLKNVENLQQWERALQKLGNPCYDYIYHWSDRIGIRRVMVNAFVYSVWEGINKTQKLCLELSLFVDKIKIGVPSETLMFNWISTESAHVQETAQPFFTTDSDDDELKSTKEADNHMREFLDRSILLQCEGSSNVRLPIEVYNIIKWLHIFNPSIIRCGASALIELPYIGRWRDLIRIELMDNKICELPLSPDCPKLKVLLLQGNVDLMDIPDSFFDHMPLLLYLDLSNTSVRNLPPSISKLTELKKLYLRGCDLFMELSPRIGQLKKLEELDLDGTLITYLPKEIRELINLQRLNLFFDRELRHEKGSKQIYKSTIIPPGIISNLTLLNYLSINVDPEDERWNENVTNILVEIFELERLETVNIYIPKTDLLELIPAHKPIDFRLVVGHHMRRFISRVTPKEEEKFKQCDRSLKFVNGENVPNRVKKNLGRFRALYLDRHMTIKSLSEFGLKNLHRLQVCLLGECNEMETIVDGSYSYDGYALPNLEFLSVFYMKSLTSIYKGPPRMDPSFLHSLKFMALHTCPMLTTIFSLDFLDNLSLLEELIVVDCPKVTTLISYNSIKHVTRVFLPRLRNISLLYLPELVSIFNGLHVGGALEKMGFYYCPKLRSLSKTELSSKCLTIIKGENRWWKSLKWKEAEWGAVGRPNFLDLIFSPINDDTDIMTQLATRNHEDRGSKSMACQTKQKIPETQEEVLNSTKQAFELVPKLQKFDVIVVPENNMVSGCGDVEGSDRSTVPEGEMQGIESSPSRPSKRKNNDEERKILVCAPVGSTEIPPEDGFPWRKYGQKQILGYKFPRNYYRCIYRYKCECLARKLVQRLDDDPNMFEVTYRGEHTCHALSTSASFPLITTKLGNISKDMTQTQSTSSQEPFKRDCPQQQ* 1212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2273 1211 MobiDBLite consensus disorder prediction 1190 1211 - -
Apr3g2273 1211 Pfam WRKY DNA -binding domain 1109 1168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr3g2273 1211 SMART LRR_typ_2 597 620 IPR003591 -
Apr3g2273 1211 SMART LRR_typ_2 550 573 IPR003591 -
Apr3g2273 1211 Gene3D - 299 362 IPR042197 -
Apr3g2273 1211 PANTHER - 475 976 - -
Apr3g2273 1211 ProSiteProfiles WRKY domain profile. 1103 1171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr3g2273 1211 Gene3D Ribonuclease Inhibitor 743 963 IPR032675 -
Apr3g2273 1211 Pfam Leucine rich repeat 526 586 IPR001611 GO:0005515
Apr3g2273 1211 Gene3D Ribonuclease Inhibitor 474 708 IPR032675 -
Apr3g2273 1211 PANTHER PROTEIN LAP1-LIKE 475 976 - -
Apr3g2273 1211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 359 IPR027417 -
Apr3g2273 1211 SUPERFAMILY WRKY DNA-binding domain 1105 1169 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr3g2273 1211 Gene3D WRKY domain 1097 1170 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr3g2273 1211 Pfam NB-ARC domain 209 352 IPR002182 GO:0043531
Apr3g2273 1211 SMART WRKY_cls 1108 1170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr3g2273 1211 SUPERFAMILY L domain-like 489 942 - -
Apr3g2273 1211 MobiDBLite consensus disorder prediction 1057 1091 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2273 Apr-Chr3 38362342 38370871 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2273 1062 1186 WRKY Transcription Factor Family AT2G40740 43.284 1.28e-28 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr3g2273 NB-ARC 1.3e-06 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2273 - - aprc:113857376 2435.6