Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2223 ATGGACAGAAAGTTTATGAATGAACAAGAAGACACTGACGTAGCTCAAGAAAACATTGCTGAGTCCCCTCCTTGTTCCACCGCCTTCAACATCGATGGCTTGGTCACTTCCCCCACTTCTTCATCAAAAAGAAGAAGAGCCATACAGAAGAGGGTGGTGCAAATCCCAATCAAGGAGACAGAAGGGTGTAGGCTAAAAGGAGAAGGCAACACTCCACCCTCGGATTCATGGGCATGGAGAAAGTACGGTCAGAAACCCATCAAGGGTTCTCCTTATCCAAGAGGGTACTACAGGTGTAGCAGTTCGAAGGGGTGCCCGGCACGGAAACAAGTGGAAAGGAGCCGCGTGGACCCCACCATGTTGGTCGTCACATACTCCTCCGACCACAACCATCCCTGGCCACTTTCTAGAAACCAGGCCAGGCCCACCAAGAAGCCCGAACCGGAGGTCGAGGTGGTACCGGATCCCGCCCAACCCGAGGAGGACAAGTTCCCAGACCTCCCCTCCGACCACTTGGGCTGGTTCGAATTGGAAGCCACCGTTCTCGAAAGCCCAATTATGACAACGGGCTACGATGCTGACATGGCGTCGGTGTTGCTGCCCATGAGAGAAGAGGACGAGTCGCTCTTCGCCGACCTCGGCGAGCTGCCGGAGTGCTCGGTGGTGTTCCGGCAAGGACTGACGGAGGAGAGCCGGCGCTACACGGCACCCTGGTGTGGGACCACAATTTAA 732 0.556 MDRKFMNEQEDTDVAQENIAESPPCSTAFNIDGLVTSPTSSSKRRRAIQKRVVQIPIKETEGCRLKGEGNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTMLVVTYSSDHNHPWPLSRNQARPTKKPEPEVEVVPDPAQPEEDKFPDLPSDHLGWFELEATVLESPIMTTGYDADMASVLLPMREEDESLFADLGELPECSVVFRQGLTEESRRYTAPWCGTTI* 244
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2223 243 MobiDBLite consensus disorder prediction 19 43 - -
Apr3g2223 243 PANTHER OS01G0750100 PROTEIN 12 241 - -
Apr3g2223 243 MobiDBLite consensus disorder prediction 130 162 - -
Apr3g2223 243 ProSiteProfiles WRKY domain profile. 74 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr3g2223 243 MobiDBLite consensus disorder prediction 142 162 - -
Apr3g2223 243 Gene3D WRKY domain 63 135 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr3g2223 243 MobiDBLite consensus disorder prediction 1 49 - -
Apr3g2223 243 SMART WRKY_cls 73 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr3g2223 243 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 12 241 IPR044810 GO:0003700
Apr3g2223 243 SUPERFAMILY WRKY DNA-binding domain 71 134 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr3g2223 243 Pfam WRKY DNA -binding domain 75 132 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Apr3g2223 Apr-Chr3 38004785 38006208 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2223 11 225 WRKY Transcription Factor Family AT1G29280 57.806 1.04e-73 223
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr3g2223 WRKY 1.8e-25 CL0274
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2223 - - gmx:100127392 378.252
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g2223 3 38004785 38006208 Apr3g2223 3 38004785 38006208 ECH