Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2218 ATGAAGAATTGTGATGAATGGAAACCTTTCCTAGTAATGATAGGAATTGATTTTTCTTTAACCGTAGTGAACATTCTTCTCAAGAAAGTTCTTGAAGAAGGAATGGACCATTTGGTTTTTATCACATATCGTCTATCAATTTCTACCATATTTTTACTCCCAATTAGCTACTTTAGGGAAAGAAATGGAAGGCCACGGCTCACATTTCAAATTCTATGTTTCCTTTTCTTCAGTGCCATTATTGGGGCATCCGTCACGCAATATTTCTTCCTTTTGGGGATACAGTACACCTCAGCTACCTTTGCTTGTGCCTTTGTCAACATGGTGCCGGTGATCACATTCATTATGGCATTACCATTTGGATTAGAAACTGTGAACATCAAATGCAGTAGTGGGAAAGCAAAGATTATTGGTACATTTGTATGCATAGGAGGGGCATTGTTGTTGACACTCTACAAAGGAAAGCCCTTGTTTGATAATTCTCACCATCAATCTGCAGTTCCTCCACTAGCCATGAGATCTGAAATGGATCAAGCTTCTAGTACTAGAATAACAGAGAAGTGGACCATTGGTGTAATAGCTTTGATTATGGGAACCCTCTTTTGGTCTTCTTGGTTTATTTTACAATCAAATATAAGTAAGAAATACCCATGCCAGTATTCTAGCACTGCCATCATGACCTTCTTTGGAGCCATGCAATCAGCTATTCTTGGCTTATCCACTGGCAGGAACTTGTCCTCGTGGTTCCTCAGGGGAAAAATACAAATAATCACTGTTCTGTATTCTGGGATAGTTGGATCAAGTGTGTGCTATGTGGGCATGGCATGGTGCGTGAAGAAGAGGGGTCCTGTGTTTACAGCAGCATTCAGCCCTCTTGTTCAGATAATGTCAGGCATGATTGATATCCCGGTTTTGCATGAGCAGCTTCATCTTGGAAGTGTGATGGGATCCATGTTGGTGATGATCGGGTTATACATTCTTCTATGGGGTAAGAGCAAGGAGATGCAGAATGGCATGTCTCAGTTTGCCCAAGAAGTTGAAGAAATAAAGGAACAAGAGCCTCATGTATAA 1071 0.4071 MKNCDEWKPFLVMIGIDFSLTVVNILLKKVLEEGMDHLVFITYRLSISTIFLLPISYFRERNGRPRLTFQILCFLFFSAIIGASVTQYFFLLGIQYTSATFACAFVNMVPVITFIMALPFGLETVNIKCSSGKAKIIGTFVCIGGALLLTLYKGKPLFDNSHHQSAVPPLAMRSEMDQASSTRITEKWTIGVIALIMGTLFWSSWFILQSNISKKYPCQYSSTAIMTFFGAMQSAILGLSTGRNLSSWFLRGKIQIITVLYSGIVGSSVCYVGMAWCVKKRGPVFTAAFSPLVQIMSGMIDIPVLHEQLHLGSVMGSMLVMIGLYILLWGKSKEMQNGMSQFAQEVEEIKEQEPHV* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2218 356 PANTHER WAT1-RELATED PROTEIN 10 342 IPR030184 GO:0016021|GO:0022857
Apr3g2218 356 Coils Coil 332 352 - -
Apr3g2218 356 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020|GO:0016021
Apr3g2218 356 Pfam EamA-like transporter family 23 150 IPR000620 GO:0016020|GO:0016021
Apr3g2218 356 PANTHER WAT1-RELATED PROTEIN 10 342 - -
Apr3g2218 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 333 - -
Apr3g2218 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2218 Apr-Chr3 37951326 37953517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2218 7 262 Nodulin-like Gene Family AT3G30340 49.027 6.22e-88 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2218 - - gmx:100791663 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g2218 3 37951326 37953517 Apr1g1552 1 25032536 25034706 PCT