Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2212 ATGGAATTGCCACACCATAACCACAAGGAGATGTCTGCTTCTGTTGTCAACGGGAATGATTCTCTCACTGGCCACATCATATCCACTACAATTGGAGGAAAAAATGGGGAGCCCAAACAGACAATAAGTTACATGGCAGAACGCGTTGTGGGAACTGGGTCATTTGGAATAGTCTTCCAGGCAAAATGCTTGGAAACTGGGGAAGCTGTGGCCATTAAGAAGGTTTTACAGGACAGAAGATATAAGAACCGTGAACTACAGTTAATGCGCATGATGGATCATCCAAATGTGATCTCTCTGAAGCACTGTTTCTTTTCCACTACAAGTACAGATGAACTTTTCCTTAATTTGGTGATGGAATATGTTCCAGAGTCTATGTATCGAGTTTTGAAGTTCTATAGTAATAATGCTAATCAGGGAATGCCACTCATCTACGTAAAACTTTACATGTATCAGATTTTCAGGGGGCTGGCTTATATCCACACTGTCCCTAGAGTTTGCCACAGAGATTTGAAGCCCCAAAACATACTGGTTGACCCTCTTACACACCAGGTTAAGATATGTGATTTTGGAAGTGCAAAAGTGATGGTCAAAGGTGAAGCTAATATATCATATATATGTTCACGTTTCTATCGAGCACCAGAGCTTATATTTGGTGCCACTGAGTATACTACTTCAATCGATATTTGGTCAGCTGGCTGTGTCCTTGCTGAACTGCTTTTGGGCCAGCCATTATTTCCTGGCGAAAATGCAGTGGACCAGCTTGTGGAGATTATCAAGGTTCTTGGCACACCCACTCGGGAGGAAGTTCGCTGTATGAATCCTAACTACAATGACTTCAGGTTTCCACAGATTAAAGCACATCCATGGCACAAGATATTCCACAAAAAAATGCCTCCAGAAGCAATTGATCTTGCTTCACGGCTTCTGCAGTACTCCCCTAGTCTTCGTTGTACTGCGCTAGAAGCATGTGCACACCCATTCTTTGATGAACTCCGTGAACCCAATGCTCGCTTGCCAAATGGACGTCCATTTCCTCCTCTGTTCAACTTTAAACAAGAGTTATCTGGAGCGTCTCCAGAGCTCATTAATAAGTTGATACCTGACCAGATGAAGCGTCAGATAGGGCTACAATATGCCCATGTGGCTGGAACATGA 1158 0.4326 MELPHHNHKEMSASVVNGNDSLTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRMMDHPNVISLKHCFFSTTSTDELFLNLVMEYVPESMYRVLKFYSNNANQGMPLIYVKLYMYQIFRGLAYIHTVPRVCHRDLKPQNILVDPLTHQVKICDFGSAKVMVKGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEVRCMNPNYNDFRFPQIKAHPWHKIFHKKMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPPLFNFKQELSGASPELINKLIPDQMKRQIGLQYAHVAGT* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2212 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Apr3g2212 385 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 7 379 - -
Apr3g2212 385 Pfam Protein kinase domain 44 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g2212 385 Gene3D Phosphorylase Kinase; domain 1 29 123 - -
Apr3g2212 385 SMART serkin_6 44 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g2212 385 PANTHER BNAANNG31110D PROTEIN 7 379 - -
Apr3g2212 385 ProSiteProfiles Protein kinase domain profile. 44 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g2212 385 Gene3D Transferase(Phosphotransferase) domain 1 125 372 - -
Apr3g2212 385 CDD STKc_GSK3 39 332 IPR039192 -
Apr3g2212 385 SUPERFAMILY Protein kinase-like (PK-like) 43 354 IPR011009 -
Apr3g2212 385 ProSitePatterns Protein kinases ATP-binding region signature. 50 74 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2212 Apr-Chr3 37909461 37914152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2212 48 367 MAP Kinase Gene Family AT3G59790 35.522 1.68e-58 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Apr3g2212 Pkinase 1.3e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2212 K14502 - gmx:100779909 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1544 1 24945478 24953477 Apr3g2212 3 37909461 37914152 PCT
Apr1g1084 1 18991795 18998203 Apr3g2212 3 37909461 37914152 PCT