Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2206 ATGGAGAGCAAAAGGGGCCTCCCATTTGGATTATGGCTCAGAATATTTGTTGGATCGATTTATCTGTGGGGAACTCAACAGTGTTGGTCTCTTAATCATGAAGGATTAGCATTGTTGGAGTTTCGGCTAAGAATAACTTCTGATCCTTTTGGTGCTCTGGCAAATTGGAATCCAAACGATTGCAGCCCTTGCAAGTGGTATGGTGTTCATTGTGTTGATGGTAAAGTGCAAATCCTGGACCTAAGTAAGATATCTCTGAAAGGGACATTGGCTCCTGAGCTTGGGAAACTTAGTCATCTAAAATATCTTGTGTTATACAAGAACAATTTTTCTGGTACCATTCCCAAAGAACTTGGAGATCTAGAAAAGCTGGAGTTGTTGGACTTAAGGGGGAATAACTTGACTGGATGTATCCCAGCAGAAATTGGCAGGATATTGTTGTCAACACAATTGTTGGTTTGTAACAATAAAATTGAACGTAGTGATTCTCAAGAGCTGGGAAAGATCAGATTGCCCTCTTTTGACAATTTTTCATCACCTCTGCCATGTGGAAAGAATAGAAAGCTTGCATGCTGCGTGAACAATATGTGGCATAGAAATATCAAGCAGAGGAACACAGTATATTTATTTGTTATTCCAATTAAAGGAGCACTCAGGAAATACCTTCTTGCCACAGCACTGTTCAAGCTAGGAAAGGCTACCTGTCATGGCCGTGAAGAGAACTACTGTGACAATCTGACTAATTCTGATGAATCAGAAATTGATCAGAATGCATCAAATCTAGTCAATTTTGCACGTCGCAAGTTACTTGATCAGTCCAGTAACCTTGCAGCTGCACCTTTTAGTGGTGGACCTACTATACAAATCAGTTCTGTTCCAACTACCCTGAGTAGTGGAGCTTTCCCAGCGGTGCCAGATGCCAATAAGAAGCAAAACCAGTCACCTACATTGCCTTCACCTTCAGATTCTCCACACATGAATCCAACAAGTCAACAGAATTCAGCTGATGGTGCTGCTGGAAAATTTTGGAAATATATTATTATAATCGCTGGTGTGGCTGTCTTGATCATTGTTATTCTGATCATACTTTGCATTTGGCGAAAACGAGCAGCAAAAGCAATAAAGCCCTGGAAGACAGGAATAAGCGGACAGTTGCAGAAAGCATTTATAACAGGGGTCCCCAAGTTGAATCGAGCAGAGCTGGAGACAGCATGTGAAGATTTCAGCAATATCATTAATAGTTTTGATGAGTGCACCATTTACAAAGGAACACTGTCCAGTGGAGTTGAGATTGCTGTAGATTCTACTATTGTCACTTCTGCCCAAGATTGGACTAAGAGCATGGAGATGGCCTATCGCAAAAAGATTGCTACATTGTCCCGTGTTAACCATAAGAACTTTACCAATCTTATTGGTTACTGTGATGAAGAACAACCATTCACAAGGATGATGGTGTTTGAGTATGCTCCAAATGGAAGCTTATTTGAGCATCTGCATGTCAAGGAAATTGAACATCTTGACTGGAGCGCAAGGATGAGGGTTATTATGGGCACGGCTTATTGTCTTCAGTATATGCATCATGATCTAAATCCACCAGTAGCTCATTCTGGCCTCAGTTCAGTTTCTATATTATTAACAGATGACTTTGCTGCTAAGATATCAGAGATCTCTTTTGGCAAGAATGTATTATTACCAGCCAACCCAACTGGAGACGAATCACTGAAATCTGAGCTGCCACCCCATGCTGATCCTGAAACCGATGTCTATAACTTTGGAGTATTGTTGCTTGAAATCATCTCAGGGAAACTACCTTACTCTGAAGAACAAGGCCACCTTGTGAGCTGGGCTGCTGAGCACTTGAATGATAAGCAAAGCTTCAGCTCTTTGATCGATCCCACGCTGCAGTCCTTCAAAGAGAATGAACTTGATGTCATCTGTGAGGTGATCAAAGAATGTGTTCAATCTGATCCAAGGTTAAGACCAGCAATGAAGGACATAAGCATCAAATTGAGGGAAGTGCTTCGCATATCACCCGAGCAAGCTGTTCCAAGACTTTCTCCACTCTGGTGGGCTGAACTAGAGATCTTATCATTGGAGGCCACCTAA 2106 0.4174 MESKRGLPFGLWLRIFVGSIYLWGTQQCWSLNHEGLALLEFRLRITSDPFGALANWNPNDCSPCKWYGVHCVDGKVQILDLSKISLKGTLAPELGKLSHLKYLVLYKNNFSGTIPKELGDLEKLELLDLRGNNLTGCIPAEIGRILLSTQLLVCNNKIERSDSQELGKIRLPSFDNFSSPLPCGKNRKLACCVNNMWHRNIKQRNTVYLFVIPIKGALRKYLLATALFKLGKATCHGREENYCDNLTNSDESEIDQNASNLVNFARRKLLDQSSNLAAAPFSGGPTIQISSVPTTLSSGAFPAVPDANKKQNQSPTLPSPSDSPHMNPTSQQNSADGAAGKFWKYIIIIAGVAVLIIVILIILCIWRKRAAKAIKPWKTGISGQLQKAFITGVPKLNRAELETACEDFSNIINSFDECTIYKGTLSSGVEIAVDSTIVTSAQDWTKSMEMAYRKKIATLSRVNHKNFTNLIGYCDEEQPFTRMMVFEYAPNGSLFEHLHVKEIEHLDWSARMRVIMGTAYCLQYMHHDLNPPVAHSGLSSVSILLTDDFAAKISEISFGKNVLLPANPTGDESLKSELPPHADPETDVYNFGVLLLEIISGKLPYSEEQGHLVSWAAEHLNDKQSFSSLIDPTLQSFKENELDVICEVIKECVQSDPRLRPAMKDISIKLREVLRISPEQAVPRLSPLWWAELEILSLEAT* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2206 701 SUPERFAMILY L domain-like 37 168 - -
Apr3g2206 701 Pfam Protein tyrosine and serine/threonine kinase 419 668 IPR001245 GO:0004672|GO:0006468
Apr3g2206 701 Gene3D Ribonuclease Inhibitor 33 189 IPR032675 -
Apr3g2206 701 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Apr3g2206 701 PANTHER LRR RECEPTOR-LIKE KINASE 8 701 - -
Apr3g2206 701 Gene3D Transferase(Phosphotransferase) domain 1 489 682 - -
Apr3g2206 701 ProSiteProfiles Protein kinase domain profile. 406 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g2206 701 SUPERFAMILY Protein kinase-like (PK-like) 395 667 IPR011009 -
Apr3g2206 701 MobiDBLite consensus disorder prediction 307 333 - -
Apr3g2206 701 MobiDBLite consensus disorder prediction 303 333 - -
Apr3g2206 701 Gene3D Phosphorylase Kinase; domain 1 382 488 - -
Apr3g2206 701 PANTHER PROTEIN MALE DISCOVERER 2 8 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2206 Apr-Chr3 37848396 37853631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2206 79 673 Receptor kinase-like Gene Family AT5G56040 25.997 5.12e-44 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Apr3g2206 PK_Tyr_Ser-Thr 7e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2206 - - gmx:100808098 1056.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g2206 3 37848396 37853631 Apr3g2206 3 37848396 37853631 ECH
Apr1g1535 1 24835793 24842131 Apr3g2206 3 37848396 37853631 ECH