Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2205 ATGGCTGAGGTAGCGACCAAGCAGAGCACTTCCCCAACCACCAACAAGAAGGAGAAGGACCACACCAACGTCCTCATGGGTCGCTACGAGCTTGGGAAGCTCCTCGGCCAAGGAACCTTCGCCAAGGTTTACCACGCGCGGAACCTCAAAACCGGTGAAGGAGTAGCCATAAAGATCATAAACAAAGAGAAGATCCTAAAGGGTGGTTTAGTCTCTCACATCAAGCGCGAGATCTCCATCCTCCGCCGCGTGCGCCACCCCAACATCGTTCAACTCTTCGAAGTCATGGCCACCAAAACCAAGATCTACTTCGTCATGGAGTACGTGCGTGGCGGTGAACTCTTCAACAAGGTTGCCAAGGGAAGGTTGAAGGAACACGTGGCAAGAAACTACTTCCAACAATTGATCTCGGCCGTTGAATTTTGCCACGCAAGAGGGGTGTACCACAGAGACCTTAAACCTGAGAATTTGTTGTTGGACGAGAATGGGAACCTTAAAGTCTCCGACTTTGGTCTCAGTGCTGTGTCTGATCAGATTAGGCAAGATGGGTTGTTCCACACCTTTTGTGGGACACCTGCTTATGTTGCTCCTGAGGTTTTGGCTAGAAAAGGTTACGATGGTGCCAAGGTTGATATTTGGTCTTGTGGTGTTGTTTTGTTTGTTTTGATGGCTGGTTATTTGCCTTTTCATGACCGTAATGTTATGGCTATGTATAAGAAGATTTACAAGGGTGAGTTTAGGTGTCCTAGATGGTTCTCCGGTGAACTCATTAGTCTTCTCTCTAGACTCCTTGATACCAACCCCGAAACAAGGTTTTCTATTCCTGAAATCATGGAGAACCAATGGTTTAAGAAAGGGTTCAAGCAAATAAAGTTCTATGTTGAGGATGATAGAGTTTGTAGTATTGTGGATAATAAGGTGCTAGACAATGATGATGATGTCATATCAGACTCCGAGGTTGAGATTATGAGGAGGAATAGTAATAATAATAGTAATGGTTCTGCTTCGTTGCCAAGACCTGCGAGTTTGAATGCGTTTGATATCATTTCGTTTTCTCAGGGATTTGATCTCTCTGGGTTGTTTGAGGAAAAGGGTGATGAGGCGAGGTTTGTGTCTGGTGCTTCAGTGTCTAAGATTATAGCGAAATTGGAGGAGACTGCTCAGTTGGTTAGCTTCACAGTAAGGAAGAAAGATTGCAGGGTCAGTTTGGAGGGTTCTAAAGAAGGTGTGAAGGGGCCATTGACCATTGCTGTTGAGATATTTGAGTTGACGTCTTCCTTGGTAGTGGTGGAGGTGAAGAAAAAGGGAGGGGATAAGGCTGAGTATGAGCAATTTTTTAACTCAGAGTTGAAACCCGCGTTGCAGAGTTTGATGATGGAGGAATCTGCATCTTCTTCTTGTGAACCTACTTCTACACATAATGAAAATGAACAACAACGAGCTCTTTCTGATTCTGCCCTCGACTTACCTTCAAATGCTGAATCTTTGTTCTAA 1494 0.4491 MAEVATKQSTSPTTNKKEKDHTNVLMGRYELGKLLGQGTFAKVYHARNLKTGEGVAIKIINKEKILKGGLVSHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFNKVAKGRLKEHVARNYFQQLISAVEFCHARGVYHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDIWSCGVVLFVLMAGYLPFHDRNVMAMYKKIYKGEFRCPRWFSGELISLLSRLLDTNPETRFSIPEIMENQWFKKGFKQIKFYVEDDRVCSIVDNKVLDNDDDVISDSEVEIMRRNSNNNSNGSASLPRPASLNAFDIISFSQGFDLSGLFEEKGDEARFVSGASVSKIIAKLEETAQLVSFTVRKKDCRVSLEGSKEGVKGPLTIAVEIFELTSSLVVVEVKKKGGDKAEYEQFFNSELKPALQSLMMEESASSSCEPTSTHNENEQQRALSDSALDLPSNAESLF* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2205 497 CDD STKc_SnRK3 28 282 - -
Apr3g2205 497 SMART serkin_6 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g2205 497 MobiDBLite consensus disorder prediction 458 497 - -
Apr3g2205 497 ProSitePatterns Protein kinases ATP-binding region signature. 35 58 IPR017441 GO:0005524
Apr3g2205 497 PANTHER - 20 463 - -
Apr3g2205 497 Gene3D Transferase(Phosphotransferase) domain 1 18 338 - -
Apr3g2205 497 ProSiteProfiles Protein kinase domain profile. 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g2205 497 MobiDBLite consensus disorder prediction 1 22 - -
Apr3g2205 497 Pfam Protein kinase domain 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g2205 497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Apr3g2205 497 SUPERFAMILY Protein kinase-like (PK-like) 25 303 IPR011009 -
Apr3g2205 497 Gene3D Kinase associated domain 1, KA1 339 459 - -
Apr3g2205 497 CDD CIPK_C 344 455 - -
Apr3g2205 497 Pfam NAF domain 340 396 IPR004041 GO:0007165
Apr3g2205 497 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 20 463 - -
Apr3g2205 497 ProSiteProfiles NAF domain profile. 338 362 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2205 Apr-Chr3 37843373 37845170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2205 1 494 CBL-interacting serine-threonine protein kinases AT4G18700 73.506 0.0 748
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Apr3g2205 Pkinase 4.3e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2205 - - gmx:100807567 783.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g2205 3 37843373 37845170 Apr3g2205 3 37843373 37845170 ECH