Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2200 ATGGCTTCCACCAAGGAACGCGATAACTTCGTCTACGTCGCCAAGCTCGCTGAACAAGCCGAGCGCTATGAAGAAATGGTGGATGCGATGAAGAATGTGGCGAAGCTAAACGTTGAATTGACGGTTGAGGAGCGAAACCTTCTATCGGTTGGGTACAAGAACGTTGTGGGTGCTCGTAGGGCTTCGTGGAGGATCCTTTCTTCGATTGAGCAGAAGGAAGAAGCGAAAGGGAACGATGTGAGTGTGAAGAGAATAAAGGAGTATAGGCAGAAAGTGGAATCTGAGTTGTCAAATATCTGCAGTGATATCATGACTGTTATTGATGAACACCTTATTCCCTCCAGTTCTTCTGGTGAACCTAGTGTCTTTTTCTACAAAATGAAGGGGGACTATTACCGGTATCTCGCGGAGTTCAAGTCCGGTGATGAGAGAAAGGAGGCTGCCGATAATTCTATGAAAGCATACCAGATGGCTTCCACTACAGCAGAGGCTGAGTTACCTCCTACGCATCCAATCCGATTGGGGTTGGCTTTGAACTTTTCTGTCTTTTATTATGAAATTTTGAACTCCCCTGAAAGGGCTTGTCACCTTGCGAAGCAGGCATTTGATGAAGCAATCTCTGAGTTGGATACTCTGAGTGAGGAGTCTTACAAAGACAGCACACTTATTATGCAGCTTCTGAGGGACAACCTCACCTTGTGGACTTCTGACATCCCTGAAGATGGAGCCGAGGAACAAAAGGTGGAGTCTGCCCGAGCTGCTGGTGGTGAAGATGCATAG 780 0.4705 MASTKERDNFVYVAKLAEQAERYEEMVDAMKNVAKLNVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNDVSVKRIKEYRQKVESELSNICSDIMTVIDEHLIPSSSSGEPSVFFYKMKGDYYRYLAEFKSGDERKEAADNSMKAYQMASTTAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGAEEQKVESARAAGGEDA* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2200 259 Coils Coil 13 33 - -
Apr3g2200 259 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Apr3g2200 259 Gene3D - 1 250 IPR036815 -
Apr3g2200 259 PANTHER 14-3-3 PROTEIN 4 252 IPR000308 -
Apr3g2200 259 MobiDBLite consensus disorder prediction 238 259 - -
Apr3g2200 259 PANTHER 14-3-3-LIKE PROTEIN D ISOFORM X1 4 252 - -
Apr3g2200 259 Pfam 14-3-3 protein 14 235 IPR023410 -
Apr3g2200 259 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Apr3g2200 259 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Apr3g2200 259 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Apr3g2200 259 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Apr3g2200 259 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Apr3g2200 259 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Apr3g2200 259 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Apr3g2200 259 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Apr3g2200 259 MobiDBLite consensus disorder prediction 240 259 - -
Apr3g2200 259 PIRSF 14-3-3 1 248 IPR000308 -
Apr3g2200 259 SMART 1433_4 7 248 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2200 Apr-Chr3 37777574 37781385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2200 1 259 14-3-3 family AT2G42590 79.771 1.83e-157 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2200 K06630 - gmx:100807980 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g2200 3 37777574 37781385 Apr3g2200 3 37777574 37781385 ECH