Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2191 ATGTCTCCAGTAATCTGTGAGATCCTCCGCTCTGGCTTTACCATAAACTCCACCCTCAGACGCAGGACACACTTGGTGCAATCTTTCTCAGTTGTTTTCCTCTACTGTATTACATACATACATATATATAGCATGGCTTCTCCTAGGGGAGCTTATTCATCAGGTTCAAGCTCTCTTCAAAACTCTCCCTCAGGTTCTGAGGGAGATATAATGGAACAAAGGAAGAGAAAGAGAATGTTATCCAATAGGGAATCGGCACGTAGATCAAGGATGAGGAAACAGCAGCATCTAGAAGGTCTTAGTGCACAAGTGGATGAGCTGAAGAAGGAGAACACCCAAATAAGCACAAGCATAGGAATCACCACACAGTTGTATCTGAAGGTGGAGGGTGAGAATGCAATTCTCAGGGTTCAGATGGCAGAACTCAGCAACAGGTTGCAGTCTCTCAACGAAATCATAAATTTCATAAACTCAAGCAACTACTTGCTCTTTGATGAGGCACAAGAGACCCAATTCAATGATTGTGCCTTCATGGATGCTTGGAACTCTCTGCCTATCAATCAACCAATCATGCCCCAAGCTGACATGTTGATGTATTGA 600 0.435 MSPVICEILRSGFTINSTLRRRTHLVQSFSVVFLYCITYIHIYSMASPRGAYSSGSSSLQNSPSGSEGDIMEQRKRKRMLSNRESARRSRMRKQQHLEGLSAQVDELKKENTQISTSIGITTQLYLKVEGENAILRVQMAELSNRLQSLNEIINFINSSNYLLFDEAQETQFNDCAFMDAWNSLPINQPIMPQADMLMY* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2191 199 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 77 92 IPR004827 GO:0003700|GO:0006355
Apr3g2191 199 PANTHER BZIP TRANSCRIPTION FACTOR 44 45 198 - -
Apr3g2191 199 MobiDBLite consensus disorder prediction 53 68 - -
Apr3g2191 199 MobiDBLite consensus disorder prediction 53 102 - -
Apr3g2191 199 PANTHER BZIP TRANSCRIPTION FACTOR BZIP124 45 198 - -
Apr3g2191 199 Coils Coil 90 117 - -
Apr3g2191 199 Gene3D - 72 154 - -
Apr3g2191 199 Coils Coil 132 159 - -
Apr3g2191 199 MobiDBLite consensus disorder prediction 69 95 - -
Apr3g2191 199 CDD bZIP_plant_GBF1 75 125 IPR045314 GO:0003700|GO:0006355
Apr3g2191 199 Pfam bZIP transcription factor 73 119 IPR004827 GO:0003700|GO:0006355
Apr3g2191 199 SUPERFAMILY Leucine zipper domain 74 127 IPR046347 GO:0003700|GO:0006355
Apr3g2191 199 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 72 118 IPR004827 GO:0003700|GO:0006355
Apr3g2191 199 SMART brlzneu 70 134 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2191 Apr-Chr3 37721439 37722763 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2191 67 199 bZIP Transcription Factor Family AT4G34590 54.110 1.09e-41 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr3g2191 bZIP_1 2.3e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2191 K25786 - gmx:778139 191.43