Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2174 ATGGATTTCCAAGTGGTTGTTCTCGGCGGTGGCGTCTCCAAGAAACTTCTCCCCCTCGTCTCACAGGAGCTTCCAAACGCTTTGCTTCCGGTGGCCAATCGCCCCCTTCTCTCTTACGTTCTGGAGTATTTGGAGCTTAGCAACCTCAAAGATCTCATTGTGGTCGTCGAAGGCGAAGAAGCCGCTCTCCATGTTGGGGCTTGGATTTCAGGGGCTTATGCTGATCGCCTCCATGTCGAGGTCGCTGCAGTTCCTGAGGATGTGGGGACAGCTGGTGCAATTCGGGCCATTTCACATCACCTAACTGCAAAAGACATTTTGGTTGTCAGTGGTGATCTTGTCACCGATGTGCCACTTGGTGCTGTTGCAGCTACTCATAGACGACATGATGCAGTTGTTACTGCTATGCTTTGCTCTGCTCCTGTAAGTGGACCTTCAGAGTCAGTATCCTCTGGTGGGAAAGACAAAACCAAGAAACCTGGTCGCTATGATCTAATAGGGCTGGATCCCACTAAACAGTTTTTAGTTCACATAGCAACCGGAGCTGAGGTTGAAAAAGATCTTCGTATTCATAAGAGCATGCTCCCTGCAGTTGGCCAGATAGAAATAAGAGCTGATCTAATGGACGCCCACTTATATGCATTCAAAAGATCAGTTCTACAAGAAGTTCTAGATCAGAAGGGTACATTTCATAGCTTAAAACATGATGTATTGCCATATCTTGTCCGGAGTCAACTGAAATCAGAAGTATTGTTAAATGGTATGCCACAAGCAGAAGAAAATGGAACCGAAAAGGTTATTTCTCAAAGCAATCAACAAATGCTATCTCAAATACTCGCTAATGCATCATTACCAACCTTTCATCTACGGCATGCACTGGGTTGTTATGGTTCTTCTGTTCGAAGAACCCATAAATGCTGTGTTTATATTGCTGGAAGTAGCAAGTACTGTACTCGCTTAAATTCTATACAGGCATACAGTGACATAAATCGGGATGTGATAGGAGAGGCTAGTCATTTATCAGGGTATTCCTTCTCTGCTCAAAACAATATCATCCATCCTTCTGCTGAGCTTGGGGCAAAAACAACTGTTGGACCACATTGTATGCTAGGGGAAGGTTCACAGATGGGTGATAAATGCAGTGTGAAACGGTCTGTCATTGGGCGTCACTGTAGGATAGGTGCCAATGTTAAGGTTGTTAATTCAGTAGTTATGAATCATGTTACTATTGGAGACTGTTGTTCGATCCAAGGTTCTGTCATCTGCAGCAACGTACAGCTCCAAGAACGTGCTGTACTAAAAGATTGCCAAGTTGGAGCAGGTTTTGTTGTCGTTGCTGGTAGTGAGTGCAAAGGGGAGATCTTGGCTAAGAAATGGAACTGA 1383 0.4483 MDFQVVVLGGGVSKKLLPLVSQELPNALLPVANRPLLSYVLEYLELSNLKDLIVVVEGEEAALHVGAWISGAYADRLHVEVAAVPEDVGTAGAIRAISHHLTAKDILVVSGDLVTDVPLGAVAATHRRHDAVVTAMLCSAPVSGPSESVSSGGKDKTKKPGRYDLIGLDPTKQFLVHIATGAEVEKDLRIHKSMLPAVGQIEIRADLMDAHLYAFKRSVLQEVLDQKGTFHSLKHDVLPYLVRSQLKSEVLLNGMPQAEENGTEKVISQSNQQMLSQILANASLPTFHLRHALGCYGSSVRRTHKCCVYIAGSSKYCTRLNSIQAYSDINRDVIGEASHLSGYSFSAQNNIIHPSAELGAKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGANVKVVNSVVMNHVTIGDCCSIQGSVICSNVQLQERAVLKDCQVGAGFVVVAGSECKGEILAKKWN* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2174 460 Pfam Nucleotidyl transferase 6 145 IPR005835 GO:0009058|GO:0016779
Apr3g2174 460 SUPERFAMILY Nucleotide-diphospho-sugar transferases 4 424 IPR029044 -
Apr3g2174 460 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA 1 458 - -
Apr3g2174 460 MobiDBLite consensus disorder prediction 142 162 - -
Apr3g2174 460 Gene3D Hexapeptide repeat proteins 350 453 - -
Apr3g2174 460 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 349 IPR029044 -
Apr3g2174 460 CDD eIF-2B_gamma_N 3 220 - -
Apr3g2174 460 CDD LbH_eIF2B_gamma_C 369 449 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2174 3 449 Eukaryotic Initiation Factors Gene Family AT4G18300 21.174 1.39e-17 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2174 K03241 - gmx:100799460 828.935