Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2153 ATGGAATTTCTCATTATTCCTTGCTCTCTTTTGTTCACTTTTGCCTGCATTTTCCTTGCACTGTTCAACACTGCGAATCGATCAAATTCCAATAAGAAGTCCCTCAAAGGCTTACCTCATGGGCCAAGGAAACTACCATTTCTAGGCAACATTCACCAATTTGTTGGGTCACTTCCCCATCGAACTTTGAGAAACTTGGCAAGCCAATATGGACCCTTGATGCACCTGCAACTTGGTGAGAAGCCACATATCATAGTCTCTTCAGCAGACATTGCAAAAGAGATTATGAAAACGCATGATGTGATCTTTGCTAATAGGCCTAATCTTCTTGCTTCCAAGTTCTGTGTTTATGCAGACAGTGACATAGCCTTTTCTTCTCATGGAAGATTTTGGAGGGAACTAAAGAAAATATGCATTTCAGAGTTGTTAAGTACAAAGCATGTTCAATCACTAAGGCACATAAGAGAAGAGGAGGTATCAAAACTAGTTAGAAATATTCATGCAAATGAAGGATCAGTTATCAACCTTACTAAGGAAATTGAGTCGCTGACAATTGCTCTACTTGCAAGGGCAGCCAATGGTAAAAGGTGCAAAGAACAGGAGGCTTTCATATCAGCAACGGGGCAAATGCTAAAGCTGTTGGGAGGTTTCTGCGTTGCTGACTTCTACCCTTCAATCAAAGTGCTTCCTCTACTTACAGGAATGAAAGCTAAACTTGAAAGGGCTCAGAGAGAGACAGATAAGATCTTGGACAACATGGTGAAGGATCACAACGAACCTAATGCAGTTGGTGGGATAGTGAATGATTTTATTCATATTCTTCTTCAAACCCAAAAGAAAGATGACTTGCAAATTCCCTTATCTCTCAACAACATCAAAGCAATCGTTTGGGACATGTTTGTTGGTGGGACTGGGGCACCATCAGCAGTTATAGTATGGGCAATGTCAGAACTGATGAAAAATCCTAAGGTCATGGAGAAGGCACAAAGTGAGGTAAGAAAGGTTTTTAATGTCAAAGGGTGTGTAGATGAAACAGACCTTCAACAATTACAATACTTAAATTCAGTGATAAAAGAAACACTGAGGCTACATCCCCCTGAAGCATTATTGCTTCCAAGAGAAAACAGTGAGTCATGTGTAATAAATGGATATGAAATACCTGCAAAGAGCAAAACCATTATCAATGCTTGGGCCATTGCAAGAGATCCAAAGTATTGGAGTGAAGCAGAGAGATTTTTACCGGAGAGATTTCTTGATAACTCAATTGACTTTAAAGGCACACACTTTGAATACATCCCATTTGGCGCTGGAAGGAGAATATGTCCTGGAATTGCATTTTCCATGTGTAACATTTTACTGTCACTTGCCAATTTGCTTTACCATTTTGACTGGAAGCTGCCAAATGGAGCAAACCCTCAAGAACTGGACATGACTGAGTCTTTTGGCCTATTAGTCAAAAGAGCAAATGATCTATGCTTAGTCCCCACTCTTTATCACCCATCAGTTAGAACTATCTGA 1518 0.4012 MEFLIIPCSLLFTFACIFLALFNTANRSNSNKKSLKGLPHGPRKLPFLGNIHQFVGSLPHRTLRNLASQYGPLMHLQLGEKPHIIVSSADIAKEIMKTHDVIFANRPNLLASKFCVYADSDIAFSSHGRFWRELKKICISELLSTKHVQSLRHIREEEVSKLVRNIHANEGSVINLTKEIESLTIALLARAANGKRCKEQEAFISATGQMLKLLGGFCVADFYPSIKVLPLLTGMKAKLERAQRETDKILDNMVKDHNEPNAVGGIVNDFIHILLQTQKKDDLQIPLSLNNIKAIVWDMFVGGTGAPSAVIVWAMSELMKNPKVMEKAQSEVRKVFNVKGCVDETDLQQLQYLNSVIKETLRLHPPEALLLPRENSESCVINGYEIPAKSKTIINAWAIARDPKYWSEAERFLPERFLDNSIDFKGTHFEYIPFGAGRRICPGIAFSMCNILLSLANLLYHFDWKLPNGANPQELDMTESFGLLVKRANDLCLVPTLYHPSVRTI* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2153 505 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2153 505 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2153 505 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2153 505 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2153 505 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2153 505 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2153 505 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2153 505 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2153 505 Coils Coil 232 252 - -
Apr3g2153 505 SUPERFAMILY Cytochrome P450 39 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2153 505 Pfam Cytochrome P450 39 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2153 505 Gene3D Cytochrome P450 31 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2153 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Apr3g2153 505 PANTHER CYTOCHROME P450 71D10 12 498 - -
Apr3g2153 505 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2153 505 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2153 505 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g2153 505 PANTHER CYTOCHROME P450 71B11-RELATED 12 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2153 Apr-Chr3 37426035 37429604 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2153 9 498 Cytochrome P450 AT3G26300 41.283 1.43e-134 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2153 - K23806 gmx:100779120 781.556