Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2150 ATGGGTTCACTGGCACCATATTCAATTGGGACATGTCTTCCTTACCTGCAACCCCAAAAATGCAACTATTCAGCACCACTTAGTTACACGATACGTGCTGTCCAAGTCCAACAACAAGTAGATGAGAGGCAGTTGAAGAGAAGAGATGCATTAGGCCTTGCCTTTAGTACTGGCCTTGTTCATGGTTTGTGGCAAACAGGAGTTGCATCAGCAGCTGAAATTCCATGTGAATTTCAAGTAGCTCCTTCAGGTCTTGCCTTTTGTGATAAACTTGTTGGAACTGGTCCTCAGGCTGTTAAGGGACAGCTTATTAAGGCTCATTATGTGGGGAGATTGGAGAATGGGAAAGTTTTCGACAGCAGCTACAATCGTGGCAAGCCACTTACGTTTCGCGTCGGTGTTGGAGAGGTGATCAAAGGATGGGATGAAGGCATTTTAGGAGGTGATGGAGTTCCCCCCATGCTTGCAGGAGGGAAACGTACACTGAAGCTTCCTCCAGAACTTGGATATGGCTCAAGAGGGGCTGGTTGTAGAGGAGGTTCATGTGTCATTCCTCCTGACTCAGTACTCTTGTTCGATGTAGAGTTCGTTAGCAAAGCATGA 603 0.4677 MGSLAPYSIGTCLPYLQPQKCNYSAPLSYTIRAVQVQQQVDERQLKRRDALGLAFSTGLVHGLWQTGVASAAEIPCEFQVAPSGLAFCDKLVGTGPQAVKGQLIKAHYVGRLENGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPPMLAGGKRTLKLPPELGYGSRGAGCRGGSCVIPPDSVLLFDVEFVSKA* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2150 200 SUPERFAMILY FKBP-like 77 198 - -
Apr3g2150 200 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 96 196 IPR001179 GO:0003755
Apr3g2150 200 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 101 200 IPR001179 GO:0003755
Apr3g2150 200 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP13, CHLOROPLASTIC 30 199 - -
Apr3g2150 200 PANTHER - 30 199 IPR044609 GO:0000413|GO:0003755|GO:0061077
Apr3g2150 200 Gene3D - 72 200 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2150 Apr-Chr3 37398997 37401058 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2150 101 198 Calmodulin-binding Proteins AT5G48570 41.837 6.42e-17 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2150 K01802 - gmx:100778390 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g2150 3 37398997 37401058 Apr3g2150 3 37398997 37401058 ECH