Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2145 ATGAGTACAGGAGACAGGCCAAAAATGCATGAGCAAACTGGTTGCTTTGATCCCAACACAATGGCAGAAAGTGTAACTGTAACCTCTCAAAAAGATAACTTTCCTCTGGCAGAGCCTGTAGCACCATCATCTATGGTTGCAGGCAACACCACAAACAGCAATAATAATAGCCTTCAAGAAAATCTCAGGCTTTCTGTGGAAGAGCTCTCCTATCACCATCACAATCCACAGCACCCTGAGGATGTCTCAAACTTAGCAAATGGAGTCAGTGCCACAACTATTGATACTCCACATCCACAGCATCTAGGTTTGAACAACAACATGGATAACCATTTAGTGCAAGAGGTTATTGATGCCTTTTCCTATCAGCAATCCACATGGGACCCAAGTGTTCAGGAATTGCAAGACATGGGCTATGCTAATCACTCACAACACCAGTCACATGAACAACAATTTCAGCAAATTGAGGCACAAAACTGCAGCCAAAACTATAACCCTTCTTCCATATTGGACCCTCCTTACCCTTCACCAGATCTCCTAAACCTTCTTCACTTACCCAGATGCTCAGCTTCATCTTTGCTCACCAACCCCACCAGTTGCATCACAAACCCAACTCAAAAAGCACCCAACTTTCATAATTCAATGGGATTTCTAGGAGACCTTCCAATAGGATCAGACAACACAAGTGCATCCTCAGTTTTGTATGATCCTCTATTCCACTTGAACCTGCCTCCACAGCCTCCAGCCCTCAGAGAGCTGTTTCAATCTCTTCCCCGTGGATACAGCTTGCCAACAAGTTCCAGAAATGGCTCTCTCTTTGGGGGAGGGGATGAGATAGATGGTGATGGAAGCCAGCTTGACATGGGAGTGTTAAAATTCAACAAGGTCGCAGCTTCTGTTGGCAAAGGAAGAAGAGGAAAAGCTGCTAAACCTTTTGCAACTGAGAAACAAAGAAGAGAGCAATTGAATGGAAAATACAAAATCTTGAGAAGTCTTATCCCAAATCCCACTAAGATGGATAGAGCATCTGTGGTTGGTGATGCCATTGAGTATATAAAAGAGTTGATGAGAACAGTGAATGAGCTCAAATTATTGGTGGAGAAGAAAAGATATGGGAAGGAGAGGTGCAAGAGGCACCAAGCTGAAGATGATGCTGCTGAGAGCTGTAACTTACCTTTTGGAGATCCAGATGGGTGCATAAGGACCTCATGGCTCCAGAGAAAATCCAAAGACAGTGAGGTTGATGTACGGATCATCGATGATGATGTTACAGTCAAGCTCTTTCAGAGGAAGAAGATTAATTGCCTGCTGTGTGTCTCCAAGGTTCTAGATGAACTTCAGTTAGAGCTTCACCATGTTGCAGGTGGACATGTTGGTGAATATTGCAGTTTCTTGTTCAATAGCAAGATAACTGAAGGTTCTTCGGTCTATGCAAGTGCCATAGCCAACAGGGTGATTGATGTTCTGGACACTCAGTACACAGCATCAGTTCCACATGCCAACAGCTATTAA 1512 0.4385 MSTGDRPKMHEQTGCFDPNTMAESVTVTSQKDNFPLAEPVAPSSMVAGNTTNSNNNSLQENLRLSVEELSYHHHNPQHPEDVSNLANGVSATTIDTPHPQHLGLNNNMDNHLVQEVIDAFSYQQSTWDPSVQELQDMGYANHSQHQSHEQQFQQIEAQNCSQNYNPSSILDPPYPSPDLLNLLHLPRCSASSLLTNPTSCITNPTQKAPNFHNSMGFLGDLPIGSDNTSASSVLYDPLFHLNLPPQPPALRELFQSLPRGYSLPTSSRNGSLFGGGDEIDGDGSQLDMGVLKFNKVAASVGKGRRGKAAKPFATEKQRREQLNGKYKILRSLIPNPTKMDRASVVGDAIEYIKELMRTVNELKLLVEKKRYGKERCKRHQAEDDAAESCNLPFGDPDGCIRTSWLQRKSKDSEVDVRIIDDDVTVKLFQRKKINCLLCVSKVLDELQLELHHVAGGHVGEYCSFLFNSKITEGSSVYASAIANRVIDVLDTQYTASVPHANSY* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2145 503 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 305 368 IPR036638 GO:0046983
Apr3g2145 503 PANTHER TRANSCRIPTION FACTOR BHLH91 9 501 IPR045895 GO:0006355|GO:0048658
Apr3g2145 503 PANTHER TRANSCRIPTION FACTOR BHLH91 9 501 - -
Apr3g2145 503 MobiDBLite consensus disorder prediction 1 20 - -
Apr3g2145 503 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 306 355 IPR011598 GO:0046983
Apr3g2145 503 SMART finulus 312 361 IPR011598 GO:0046983
Apr3g2145 503 CDD bHLH_AtMYC1_like 311 375 IPR045896 -
Apr3g2145 503 Gene3D - 302 370 IPR036638 GO:0046983
Apr3g2145 503 Pfam Helix-loop-helix DNA-binding domain 312 355 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2145 Apr-Chr3 37341464 37343437 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2145 9 501 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 37.925 6.09e-93 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr3g2145 HLH 4.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2145 - - gmx:100782512 802.357