Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2132 ATGCGCACAAAGCTTGTCATGTTGGCTTCGTTCCCTGGTTACACAAAACCCTTTGCAATTGCAAGAGTAAACCCTTATCTTCCTAAGCTCAGGGCATCTTCTCTGCGCCATGACTACCCCCTTGCAAGCAAAATTATTGTTAAAAATTTACCATACTCTACCGGTGAGACCACTTTGCAGAAGGAATTTTCAAATTTTGGCAAGATAGCTGAAGTGAAAATGGTTAAAGATGCAAGTACGAAAAAATCTAAGGGCATTGCTTTTATTCAATATACATGCCAAGATGAGGCTATGCTTGCACTTGAAACCATGGATCAGAAGGATTTTTATGGTCGAAAAATCTATGTAGAAATTGCAAAACTGGGTTGGGATGAATTTGGTGCACCCCCTAGGGCCTCAGGACCCCCAAAGAAGTGGGATTTGCCAGAGCAAGGGGAGGTGGTGGATTGCTGGTACTGA 459 0.4292 MRTKLVMLASFPGYTKPFAIARVNPYLPKLRASSLRHDYPLASKIIVKNLPYSTGETTLQKEFSNFGKIAEVKMVKDASTKKSKGIAFIQYTCQDEAMLALETMDQKDFYGRKIYVEIAKLGWDEFGAPPRASGPPKKWDLPEQGEVVDCWY* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2132 152 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL ISOFORM X1 21 145 - -
Apr3g2132 152 SUPERFAMILY RNA-binding domain, RBD 31 124 IPR035979 GO:0003676
Apr3g2132 152 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 45 114 IPR000504 GO:0003723
Apr3g2132 152 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD 21 145 - -
Apr3g2132 152 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 43 121 IPR000504 GO:0003723
Apr3g2132 152 CDD RRM_SF 45 117 - -
Apr3g2132 152 Gene3D - 31 145 IPR012677 -
Apr3g2132 152 SMART rrm1_1 44 117 IPR000504 GO:0003723
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2132 43 124 Eukaryotic Initiation Factors Gene Family AT2G36660 36.585 4.22e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2132 - - gmx:100305971 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g2132 3 37259954 37262999 Apr3g2132 3 37259954 37262999 ECH