Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2094 ATGGCTGCTTCTTCCATGGCTCTCTCATCCCCAGCCTTGGCTGGCAAGCCCGTCAAGCTGTCCCCATCAACCCCAGATTTGGGCGTTGGGAGGGTTAGCATGAGGAAGACCGTCACCAAGCAGGCAACTTCCGGAAGCCCATGGTACGGCCCAGACCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCCCCATCCTACCTCACTGGTGAGTTCCCAGGCGACTACGGTTGGGACACTGCTGGGCTTTCCGCTGACCCAGAAACCTTCGCAAGGAACCGTGAGCTTGAGGTCATCCACTCCAGGTGGGCCATGCTTGGAGCCCTGGGCTGCGTCTTCCCCGAGCTCTTGTCCCGCAACGGTGTTAAATTCGGTGAGGCCGTGTGGTTCAAGGCTGGTTCCCAGATCTTCAGCGAGGGTGGGCTTGACTACTTGGGTAACCCAAGCCTGATCCATGCCCAGAGCATCCTCGCCATCTGGGCCACTCAGGTGATCTTGATGGGTGCCGTCGAGGGTTACCGTATTGCCGGTGGGCCTCTTGGAGAGGTCACAGACCCAATCTACCCTGGTGGGAGCTTCGACCCATTGGGCCTTGCTGATGACCCAGAGGCTTTTGCTGAGCTTAAAGTGAAGGAGCTCAAGAACGGTAGGTTGGCCATGTTCTCCATGTTTGGGTTCTTCGTTCAGGCCATAGTGACCGGAAAGGGCCCACTTGAGAACCTCGCCGACCACCTTGCAGACCCAGTGAACAACAATGCCTGGGCCTACGCCACCAACTTCGTCCCCGGAAAGTGA 795 0.5849 MAASSMALSSPALAGKPVKLSPSTPDLGVGRVSMRKTVTKQATSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2094 264 SUPERFAMILY Chlorophyll a-b binding protein 47 261 - -
Apr3g2094 264 MobiDBLite consensus disorder prediction 1 30 - -
Apr3g2094 264 Pfam Chlorophyll A-B binding protein 64 230 IPR022796 -
Apr3g2094 264 Gene3D Chlorophyll a/b binding protein domain 55 257 - -
Apr3g2094 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 264 - -
Apr3g2094 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2094 Apr-Chr3 36881737 36882776 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2094 1 264 Chloroplast and Mitochondria Gene Families AT1G29930 89.139 4.87e-173 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2094 K08912 - gmx:100799813 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g2094 3 36881737 36882776 Apr3g2094 3 36881737 36882776 ECH