Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2089 ATGTCTGTTGAACCTAAAGAACTTTACTACCAGGACCTTGTCCTAGACCATAATCAGCAACAGGGCACAGGAGGATCTACCATGTATGAAAAACACTTTTCTTCCTTAGTTCCTTCAGGTTCAACAGCATTTGATTCATCACAAGCCTTTGATCCATCGTATATGAGCTTCACTGAGTGTTTGCAAGGAGGCATGGACTACAATTCACTTGCAACTTCTTTTGGCTTGTCTCCTTCCTCATCAGAGGTTTTTTCATCTGTTGAAGGAAATCAAAAACCGGCAGAAGGAGATGTAGGTGGTGGCAGTGACACCCTTGCTACCCTTAACTCTTCTATCTCTTCTTCATCCTCTGAAGCTGGGGCTGAAGAAGATTCAGGAAAGAGTAAGAAAGATAGGCAGGTGAAAGCAGAAGAAGGAGGAGAGAACTCTAAGAAAGGGAACAAGGACAAGAAGAAAGAGAAGAAGCAGAAGGAACCAAGGTTTGCTTTCATGACTAAGAGTGAGGTTGATCACCTAGAAGATGGGTACAGATGGAGAAAATATGGACAGAAAGCTGTCAAGAATAGCCCTTATCCAAGGAGCTACTACAGGTGCACTACCCAGAAGTGCACAGTGAAGAAACGCGTAGAGAGGTCATTTCAAGACCCAACCACTGTGATAACAACGTATGAAGGTCAGCACAATCATCCGGTCCCCACATCTCTTAGAGGGAATGCGGCTGCGGGAATGTTCACACCACCTTTGCTAACCACACCAACTCCACTCACAGCAGCTGCAGTTGGGTCAAACTTCCCCCAAGATCTCTTCTTTCAGATCCATCATCACCACCACAACACCCTCTTCACCACACAGCAAACAAACACTACCACTAGTGCTAATGCTAATGCTGCTGCTTCCATTTACTCATCGCACAACATTAACAACTCTCTTCTTCACCACCCGTATCATCACCATCAACTTCCTCCTGAATATGGCCTCCTTCAAGACATAGTCCCTTCCATGTTCCTCAACAAGACCCACCAGAATTAA 1029 0.4509 MSVEPKELYYQDLVLDHNQQQGTGGSTMYEKHFSSLVPSGSTAFDSSQAFDPSYMSFTECLQGGMDYNSLATSFGLSPSSSEVFSSVEGNQKPAEGDVGGGSDTLATLNSSISSSSSEAGAEEDSGKSKKDRQVKAEEGGENSKKGNKDKKKEKKQKEPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFQDPTTVITTYEGQHNHPVPTSLRGNAAAGMFTPPLLTTPTPLTAAAVGSNFPQDLFFQIHHHHHNTLFTTQQTNTTTSANANAAASIYSSHNINNSLLHHPYHHHQLPPEYGLLQDIVPSMFLNKTHQN* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2089 342 ProSiteProfiles WRKY domain profile. 167 232 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr3g2089 342 SUPERFAMILY WRKY DNA-binding domain 164 232 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr3g2089 342 Pfam WRKY DNA -binding domain 173 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr3g2089 342 MobiDBLite consensus disorder prediction 103 121 - -
Apr3g2089 342 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 21 334 IPR044810 GO:0003700
Apr3g2089 342 MobiDBLite consensus disorder prediction 80 162 - -
Apr3g2089 342 PANTHER WRKY TRANSCRIPTION FACTOR 81 21 334 - -
Apr3g2089 342 SMART WRKY_cls 172 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr3g2089 342 Gene3D WRKY domain 143 233 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr3g2089 342 MobiDBLite consensus disorder prediction 122 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2089 Apr-Chr3 36834463 36836507 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2089 38 338 WRKY Transcription Factor Family AT4G18170 50.809 9.97e-77 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr3g2089 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2089 - - gmx:100787050 423.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g2089 3 36834463 36836507 Apr3g2089 3 36834463 36836507 ECH