Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2081 ATGTCAAAATGCTTGGCTCAACCGGCCAACCCATTTAACCTGCCATTTGGACTAGGAGGTATACCTGAGGGACATCACAAGGGTCTACTCACAACAGATGCAGAGGTGAAGAATAAGCCACCTAGTCGACATTTCATCCATGGATATCACTTGATCCAAGGAAAGATGAACCATGGAATGGAGGACTATATTTTTGCTCAACGCAGGAATCTCAATGGTTGTGACTTAGGGTTGTATGCAATATTTGATGGTCATTCCGGTAATGAAGTTGCAAAATATTTGCAGAGCCATCTGTTCGAAAATATACTGAGTCAGTCTGATTTCTGGAAAAATCCAGTCCATGCTGTTAAGAAAGCATGTAAAGATACAGATGATGAGATTTTAGAAAACATAGCTGGTTCACGTGGAGGATCAACTGCTGTAGCAGCAATACTAATTAATGGAGTAAAGCTACTGGTAGCCAATGTTGGTGATTCTCGAGCTATATCATGCAAAAATGGTCTGGCAAAACAACTTACTACAGATCATGAACCAGAGAAGGAGAAAGACCTTGTTGAGAGCAGAGGGGGTTTTGTGTCTAATAAACCCGGATGTGTTCCAAGAGTGGATGGCCAATTAGCAATGACACGGGCATTTGGAGATGGAAAACTGAAGGAACACATTACCGCAGAACCAGATGTGACGATTCGGAAGATTGATGAAGACACTGAATTCATCATTTTGGCAAGTGATGGTCTGTGGAAGGTAATGACAAATCAGGAGGCTTGTGACTGTATCAGGGATGTCGACCATGCGCAAAAAGCATCTAGAAAGTTAGTTAAAGAAGCCAAATCTCTAGGAAGCTATGACGACATTTCATGCATAGTCATTATGTTCTAG 879 0.4175 MSKCLAQPANPFNLPFGLGGIPEGHHKGLLTTDAEVKNKPPSRHFIHGYHLIQGKMNHGMEDYIFAQRRNLNGCDLGLYAIFDGHSGNEVAKYLQSHLFENILSQSDFWKNPVHAVKKACKDTDDEILENIAGSRGGSTAVAAILINGVKLLVANVGDSRAISCKNGLAKQLTTDHEPEKEKDLVESRGGFVSNKPGCVPRVDGQLAMTRAFGDGKLKEHITAEPDVTIRKIDEDTEFIILASDGLWKVMTNQEACDCIRDVDHAQKASRKLVKEAKSLGSYDDISCIVIMF* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2081 292 ProSiteProfiles PPM-type phosphatase domain profile. 46 292 IPR001932 -
Apr3g2081 292 SMART PP2C_4 36 290 IPR001932 -
Apr3g2081 292 Gene3D - 45 292 IPR036457 -
Apr3g2081 292 Pfam Protein phosphatase 2C 58 284 IPR001932 -
Apr3g2081 292 PANTHER PROTEIN PHOSPHATASE 2C 28-RELATED 33 292 - -
Apr3g2081 292 PANTHER ALPHABET, ISOFORM E-RELATED 33 292 - -
Apr3g2081 292 SUPERFAMILY PP2C-like 43 292 IPR036457 -
Apr3g2081 292 CDD PP2Cc 45 290 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2081 Apr-Chr3 36738299 36741733 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2081 43 253 PP2C-type Phosphatase Gene Family AT2G34740 66.509 5.76e-103 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2081 - - gmx:100814772 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g2081 3 36738299 36741733 Apr3g2081 3 36738299 36741733 ECH