Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2080 ATGGAATCAATAGTTCTTGGGTTGGCAACCACTATGTTGGACAAGTTAGCAACCAGTGCTTTTCAGAATATTTCCATGGCAAGGGGTCTATATGATGACGTGGGCAACCTCCAAAACTCTCTCACAATCATCAGTGCCTTCATTGTGGATGCTGAGAACAAGCAAACCCAAAACCAAGCCATCGTGGTGTGGCTGCGCCGGCTCAAAGAAGCTTTCTTTGATGCCCGTGACATCTTGGATGAGATTGAGTGTGAGTCCTTGAGGAATCAAGTTGTCAAGAAGTATGCAAACTTCTTCACAAAGGTACACCGCTTTTTCTCACCCTCTAACCCTCTTGTGTTTCGTGCTAAGATGGCCCACCAGATCAAGGACATCAAGGACAAAATAGATGAGATAGCTTCTCTTAGGATGAAGTTGGGTCTCTCAGAGATCCATGCAAGTAGCAGTAGTAGTAATGTGCCAGACAATCAGAAGATGGCTAGGAGAGAGACACATTCTTATGTTAGGCCTTCTTATGTGATTGGTAGAGATGAGGAGAAAGAGAAGATTATTATGTCTTTGATGGTGCTGCCATCAGATGGTGATGAGATTGATGTTGTTCCAATTGTTGGAATTGGAGGATTGGGGAAGACCACACTTGCACAGATGGTTTACAATGATGAAAGGGTGGATGAACATTTTAAGTTGAAAATGTGGGTGTTTGTGTCTGATGATTTTGATGTTAAGAGGCTGGCACTTGAGATTCTTAAAGCTATGCATGGAACAGGTGTAGATGCTCACAATTTAAGTTTTGATCAAGTACAAAATCTACTCCGTGAGGGATTATATGATCAAAAATTTCTGCTAGTTCTAGATGACGTTTGGAACGAAGATTATAGGAAATGGCTTGAATTGAAAGATCTTTTACTAGGCATGAATGATGGAAATAACAGAACTGGTAGCAAGATCATCACCACCACCCGTAGTGAGAAGGTTGCTTTGATAATGGGGAAAATGTATAAACACAACTTGAAATATCTTCCTGAAGAGGATTGTTTGAAGCTATTTGTTAAGTGTGCATTTCCAGCTGGGGAGGAGAAACAACACCCAAAGCTTCTAGAAATTGGGAAGGACATTGTTAGAAAGTGTAAAGGTTTGCCCCTGGCAGTGGTAAGTTTGGGGTGCGCGCTATACTCAAAACCTTATGAAAGAGAATGGAAGAAAATAAGAGATAGTGAAATTTGGAAAATGAACCAACAAGATGATGGCATTTTGGCTCCATTAAAACTGAGCTATAATCACTTGCCATCTGAATTGAAACAGTGCTTCTCTTATTGTTCAATTTTTCCAAAGGGTTATGAGTATACTAATCTGGAGCTGATTTCATTTTGGATGGCCCATGGACTACTACAAACCAAAAATGAAGATGAAGAGCCAGAAGATCTTGGTGAGTTGTATATTCAGGAGTTAGTTTCAAGATCTTTCTTTGAAGGTGCTCTTGAAGAACAGGTTGTTATTGATGGTCTTATTTTTGAAGAACTTAAGCTTCTCGGCATCTCCTATTTCAAAATGCACGATCTTATTCATGACCTTGCTGCGTCCACAATGCAAAGTGAAAGGGCAGTAGTAAAATTTAATTCAACAAAAGTTGAAGAAAAGGTGCAGCATTTATCATTTTCAGACAGTGGTGAAGGAGTTCCAACTTTTGGTGAAAAGTTGAATAAGGTCCAAACCATTGGATTCTGGCATGCAAGTCGAAGTGCTGATGCAATTGCTGAACCATTTCTCAAATGGATCTGCAAGGAATTCAAGTACCTCAGGGTGTTGAACATACAAGGTTCAAATTTTCAATTCTTGCCAGACTGCTTCAATAAAATGAAACATTTGAGGTATCTTAATCTCAGCTATTGCCAGAGGATGGAAAAGCTCCCAGATTCCATTTGCAAGCTCCAAAGCTTAGAGGTTTTAAATCTCTGTAAATGTGTAGCACTCAAATATATACCCAAAAAATTGAGGAATCTTGTAAGCCTTAGGATTCTGTGGATTACCACACAGGTCACTGATTTGTCTTATTTAAGTATTGGGAGCTTAAAGTATCTACAAATTTTAATTTTGTGGAATTGTGAAAGTTTAGTCTTCCTTCCACGTGATTTGAGGCACCTGACTGCTTTAAAAAGGTTGAGTATTGAGGCTTGTTGTGAGGTAGTTAGTTTTAAGGATGAAGAACAAGGAGAAAAGGAAAACTACTCCTTGAAACTTGAACAATTTTCTATTGACAAATTACCCAAATTAGCAGCATTACCTCTTTGGCTTAGAAGGTCTGCTAAAACATTGCGATACATGGGCCTGTCAGAATGTCCGAGCTTAACAGCATTGCCTGAATGGTTGTCAAATCTGACATCGCTTGAGACTCTTCTCATCGGTGATTGTCCAAACTTGACACTACCACAGAACATGGATCGTCTTGATAGCCTTCAGAACTTAAAGATATATGGATGCCCACAGCTAGTTGAGAGATGCAAACAAGATACTGGCCCTGACTGGTCCAAAATAGCTCATATTCCAAATGTTGAACTTGAATTTGCCAGCGTTTAG 2574 0.3967 MESIVLGLATTMLDKLATSAFQNISMARGLYDDVGNLQNSLTIISAFIVDAENKQTQNQAIVVWLRRLKEAFFDARDILDEIECESLRNQVVKKYANFFTKVHRFFSPSNPLVFRAKMAHQIKDIKDKIDEIASLRMKLGLSEIHASSSSSNVPDNQKMARRETHSYVRPSYVIGRDEEKEKIIMSLMVLPSDGDEIDVVPIVGIGGLGKTTLAQMVYNDERVDEHFKLKMWVFVSDDFDVKRLALEILKAMHGTGVDAHNLSFDQVQNLLREGLYDQKFLLVLDDVWNEDYRKWLELKDLLLGMNDGNNRTGSKIITTTRSEKVALIMGKMYKHNLKYLPEEDCLKLFVKCAFPAGEEKQHPKLLEIGKDIVRKCKGLPLAVVSLGCALYSKPYEREWKKIRDSEIWKMNQQDDGILAPLKLSYNHLPSELKQCFSYCSIFPKGYEYTNLELISFWMAHGLLQTKNEDEEPEDLGELYIQELVSRSFFEGALEEQVVIDGLIFEELKLLGISYFKMHDLIHDLAASTMQSERAVVKFNSTKVEEKVQHLSFSDSGEGVPTFGEKLNKVQTIGFWHASRSADAIAEPFLKWICKEFKYLRVLNIQGSNFQFLPDCFNKMKHLRYLNLSYCQRMEKLPDSICKLQSLEVLNLCKCVALKYIPKKLRNLVSLRILWITTQVTDLSYLSIGSLKYLQILILWNCESLVFLPRDLRHLTALKRLSIEACCEVVSFKDEEQGEKENYSLKLEQFSIDKLPKLAALPLWLRRSAKTLRYMGLSECPSLTALPEWLSNLTSLETLLIGDCPNLTLPQNMDRLDSLQNLKIYGCPQLVERCKQDTGPDWSKIAHIPNVELEFASV* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2080 857 Gene3D Ribonuclease Inhibitor 766 837 IPR032675 -
Apr3g2080 857 PRINTS Disease resistance protein signature 199 214 - -
Apr3g2080 857 PRINTS Disease resistance protein signature 274 288 - -
Apr3g2080 857 PRINTS Disease resistance protein signature 376 390 - -
Apr3g2080 857 PRINTS Disease resistance protein signature 617 633 - -
Apr3g2080 857 SUPERFAMILY L domain-like 516 840 - -
Apr3g2080 857 PANTHER DISEASE RESISTANCE PROTEIN RP 19 834 IPR044974 GO:0006952
Apr3g2080 857 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 439 IPR027417 -
Apr3g2080 857 CDD RX-CC_like 6 134 IPR038005 -
Apr3g2080 857 Gene3D - 155 334 IPR027417 -
Apr3g2080 857 PANTHER OS08G0543100 PROTEIN 19 834 - -
Apr3g2080 857 Gene3D Ribonuclease Inhibitor 545 753 IPR032675 -
Apr3g2080 857 Pfam NB-ARC domain 177 405 IPR002182 GO:0043531
Apr3g2080 857 Gene3D - 10 134 - -
Apr3g2080 857 Gene3D - 425 528 IPR036388 -
Apr3g2080 857 Pfam Rx N-terminal domain 11 94 IPR041118 -
Apr3g2080 857 Gene3D - 339 424 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2080 Apr-Chr3 36731763 36735958 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2080 196 829 WRKY Transcription Factor Family AT5G45050 23.077 4.24e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2080 - - cam:101500245 1285.78