Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2063 ATGGTTACAACTTCTGCAACTTGGTTCCTCTTTATTCCTATAATTTTATCGTTATGCCTCATAACATTAGGTGCAACAGTGGTACAAGACCTTAAAAACTTACACCAACCTCCAAATTTTAACACAACAATCGTGTCCAACTGTCTCAAGAACCCATCTCTTAGGTACTGCAATTCCAATCCCATGGACCTTGATGAAATATTCAAATTCAGTATTGTTGCTAGCCATCTATGCAATGAATCAAAGAACCCAAATTGTGTGGAGTCATTCCCCAAAATTGATCTTAGAAACCGCCCAAATATTGCAACTCTTTATTTATCCTTTGGTTTCTTTTGGAAGTATTGCCCCTTGAGCATTTTGTCCATTGATTTGTCCAACAATTCTATGAAGGGTAGTTTTCCAATTGATGTTCTCTATTGCACCCAAATCCATTCTCTTGATTTAAGTGTCAATGAATTTTCTGGTCACATTCCAATTCAGAGTTTCTCTCCCCTAACCAACCTCTCTTTTCTGAACCTCTCTTATAATTGTTTTTCAGAGAGTAAATTGTCTGATTCGCAATTCTTCAAAAGGTTTAACTCTTCTAGTTTTCTTCATTCTGGTGCTCTCTTGGATCACAAAAGGTTTACATTAAATGCTGTTATTCTATTAATTGGCTTTCCCATCCTTGTCATGTTGATGGTAATTTGTTTGGGATGGATTTGTTTCCAAAGACCAGATTTTCTACCAAGTAAACTTCAAAGAAGTAAGATGTTTACACCAGCAATTCTAAAGGCAGCAACTGATGGTTTTTCAAATAAGAATTTGGTGGGGAAGAGTGATGTTGTTCACATCTACAAAGGGATCTTGAGAGATGGTACTGAAGTGAAAATTGAGATCTACTTGGATGATATATCAATGGATAGTTATCATAAATTTGTTAAAGAATGCAAGGTTCTGTCTAATTTAAATCACAAGAATCTTGTACGAGTTCTGGGGTGGTGTAGGAGCAGAAAATTCAGGGCTATTATTACAGAATGGACAAAAGAAGAAAATGTTGAAATGTGGTTATCAGGGTCAGCTTCACCTTGGAATCATAGACTAAAAGTGATAAAAGGGATTATAGAATGCATGTGTTATCTACTGGAGGAATGGCCTGAAATTGACTATGACCTCAACATAAGTACTGTTTTATTGTCTGACAATATGGAACCACTAATTTCGAGGTTCAAAATTGGAGATCAGAACAACAATCGTAGAAAGATATTCAAGTTTGGAGTATTCATTCTAGAGATGATACTAAACAGAAAGATTCAAGAGGAGTTTGATGTAGGTGATTCTGGATTTATTAGGTACATGAGAACCCTTAGTCCAATAGACTTGCAGCAGATTATTGATGAGACAATGGAAGTAACTGAAACATCTTTGCATCAAGTTAAACAGGTTCTATCCCTAGGATTAATGTGCATAGACCAATCAAACAATGAGCAGCCAAGCTTGGCCCTGATATTTAAGACTATAGCAAGAGCTTACAAGACCAGCTTTGTTTTGCCATCTGCAAATCATAGACTATTTCATGGAGATAGATTTAAGGGATCTAGATAA 1584 0.3598 MVTTSATWFLFIPIILSLCLITLGATVVQDLKNLHQPPNFNTTIVSNCLKNPSLRYCNSNPMDLDEIFKFSIVASHLCNESKNPNCVESFPKIDLRNRPNIATLYLSFGFFWKYCPLSILSIDLSNNSMKGSFPIDVLYCTQIHSLDLSVNEFSGHIPIQSFSPLTNLSFLNLSYNCFSESKLSDSQFFKRFNSSSFLHSGALLDHKRFTLNAVILLIGFPILVMLMVICLGWICFQRPDFLPSKLQRSKMFTPAILKAATDGFSNKNLVGKSDVVHIYKGILRDGTEVKIEIYLDDISMDSYHKFVKECKVLSNLNHKNLVRVLGWCRSRKFRAIITEWTKEENVEMWLSGSASPWNHRLKVIKGIIECMCYLLEEWPEIDYDLNISTVLLSDNMEPLISRFKIGDQNNNRRKIFKFGVFILEMILNRKIQEEFDVGDSGFIRYMRTLSPIDLQQIIDETMEVTETSLHQVKQVLSLGLMCIDQSNNEQPSLALIFKTIARAYKTSFVLPSANHRLFHGDRFKGSR* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2063 527 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 7 526 - -
Apr3g2063 527 SUPERFAMILY Protein kinase-like (PK-like) 242 500 IPR011009 -
Apr3g2063 527 Gene3D Ribonuclease Inhibitor 37 208 IPR032675 -
Apr3g2063 527 ProSiteProfiles Protein kinase domain profile. 264 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g2063 527 Gene3D Transferase(Phosphotransferase) domain 1 406 502 - -
Apr3g2063 527 Gene3D Phosphorylase Kinase; domain 1 240 340 - -
Apr3g2063 527 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 7 526 - -
Apr3g2063 527 SUPERFAMILY L domain-like 88 181 - -
Apr3g2063 527 Pfam Protein tyrosine and serine/threonine kinase 268 408 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2063 Apr-Chr3 36600298 36601989 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2063 121 500 Receptor kinase-like Gene Family AT5G45780 23.146 1.18e-25 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr3g2063 PK_Tyr_Ser-Thr 5.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2063 - - gmx:100779045 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g2063 3 36600298 36601989 Apr3g2063 3 36600298 36601989 ECH