Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2046 ATGGCGTCGTCGAAGGTTGTCTCGACGAATCCGGATCTGCCACGCGACTCTTCTATATCATCTTCTCTCTCTAACCTTCTTTCCGATCCTCATCCCAACAACTCCATGGACGATCTTCTCAAGTCCATCTACACTCCTCCATCTTCCAAAGACCCAAAAACCGTTGATGATGTTTGGAAAGAGCTCGTATCTGGAACGCAGTCTCATGACAACAATGAAATGACCCTTGAGGATTTTTTGACCAAAGCTGGTGCTGTTAGAGATGAAGATGTTGGAGGGGTTCTTCCTCCTTCCCCTTCTCCTTCTCCTTTTCCTCTTCCTCCTCCCGCTGAGGCTTCTTCTTCTTCTGTTGAGCCTTTTGGGAATGCACCGTCTCCTTCTGTGGGTAAACCCAAGAGAAGGGCCGTCGAGGAGCCTCTTGATAAGGCCGCTCTTCAGAAGCAGAGAAGGATGATCAAGAATAGAGAGTCTGCTGCTAGGTCCAGGGAACGCAAACAGGCTTACACATCGGAGCTTGAGTATCTGGTTCACCAGTTGGAGCAAGAGAATGCGCGGCTATTGAGTGAAGAGCTCATGGAGTGCATCATTCCAATTGAGGAGAAGACTAAACCGAAAGAAAAACTTCGAAGAATAAATTCAGCACCATCTATGATCTGTCTGTTATCAACAGACTAG 675 0.4756 MASSKVVSTNPDLPRDSSISSSLSNLLSDPHPNNSMDDLLKSIYTPPSSKDPKTVDDVWKELVSGTQSHDNNEMTLEDFLTKAGAVRDEDVGGVLPPSPSPSPFPLPPPAEASSSSVEPFGNAPSPSVGKPKRRAVEEPLDKAALQKQRRMIKNRESAARSRERKQAYTSELEYLVHQLEQENARLLSEELMECIIPIEEKTKPKEKLRRINSAPSMICLLSTD* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2046 224 Gene3D - 145 195 - -
Apr3g2046 224 MobiDBLite consensus disorder prediction 1 57 - -
Apr3g2046 224 MobiDBLite consensus disorder prediction 96 112 - -
Apr3g2046 224 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 144 189 IPR004827 GO:0003700|GO:0006355
Apr3g2046 224 SMART brlzneu 142 214 IPR004827 GO:0003700|GO:0006355
Apr3g2046 224 PANTHER OS05G0437700 PROTEIN 2 214 - -
Apr3g2046 224 CDD bZIP_plant_BZIP46 146 186 - -
Apr3g2046 224 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 214 IPR043452 GO:0003700|GO:0045893
Apr3g2046 224 SUPERFAMILY Leucine zipper domain 146 189 IPR046347 GO:0003700|GO:0006355
Apr3g2046 224 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 149 164 IPR004827 GO:0003700|GO:0006355
Apr3g2046 224 MobiDBLite consensus disorder prediction 1 32 - -
Apr3g2046 224 Pfam bZIP transcription factor 143 189 IPR004827 GO:0003700|GO:0006355
Apr3g2046 224 MobiDBLite consensus disorder prediction 81 141 - -
Apr3g2046 224 Coils Coil 169 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2046 Apr-Chr3 36445438 36449270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2046 7 213 bZIP Transcription Factor Family AT5G44080 40.562 7.12e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr3g2046 bZIP_1 5.8e-15 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2046 K14432 - gmx:778147 223.016