Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2041 ATGGATACTTTATACAATATTGAAGCTATAGGTAATGTGAAGCCTGTACTGCTAATGATAGCGGTTCAGTCTTTATATGCAGTGGTGAATATCTTGTTAAAGTTGGTAGCAGATGATGGAATGAGCTTAAGTGTTCTTATTGCCTACAGATTCATATTTGCTTCTGCCTTCATTGTTCCGGTTGCTCTCATCTTTGAAAGGAAAAGCCTGCAAAATCTTACTGGGCAAGTTCTATTCCAAGCTCTTCTTTGTGGGTTATTTGGGGGAACCTTACTACAAAACCTCTATGTTAAATCCTTGGCCTTGGTATCTGCAATGTATGCTACAGCCATGTTGAACCTCATCCCTGCTGTGACCTACATCTTGTCTGTTTCTCTTAGACTTGAAAAGTCAAATCTTGGAACACTGCCTGGGATGGTCAAGTTTCTAGGCACTCTAACAGGAATTGGTGGTGCCATGATCCTCACTTTCTACAAAGGAAGAAGGATAAGCATCTGGTCAACACACATTGACTTGGTGCAACAACATGCTGCTGCATCACCACATGGTGCTCCCACTGGTTCACGCTTGTGGGGCTGCATGCTAGCTCTGGGAACCTCTCTGAGCTACTCTTTTTGGTTGATTATCCAGACAAAGATGAGTAAAAAGTTTCCGTGGCACTATTCAATTGCGGCATTAACATCTGCAACGAGCTCAATCCTATCCATCATATATGCCCTTTGTACGGAGAGAGATTGGACGCAGTGGAAACTTGGCTGGAACTTGAGGCTTCTAGCAGCAGTTTCTTCGGGTGTCTTTGCCTCTGGAGTGTGTTATCCCATGTTAGCATGGTGTGTGCGCAGGAAAGGACCTCTCTTTGCGTCTGCTTTCAGTCCTTTTATGCTTGTCATAGTGACCCTTGCCGGCTCATTGGTACTAGATGAGTCTCTTCACATCGGAAGTCTAACAGGATCAGTGTTGATTGTGAGCGGATTGTACATGTTGTTGTGGGGTCAAAATAACGAAACATGGAAGGGGGAGACTGAGATGGTGTCCTCAAAAGGCTTGGTTCAATGTGATTCAGTCCACGTTGCTGACCCACCCTTGGCATGCAATCAAAGGGAGCATGACAAGAAGATTGCTGCAAGTGTTCCTCCATATACACCTACCCTCTCCCTCCTTCCATCCTTTGTTTCGAGCTCTAAAACATCAAGACTTCTGTTCAGTGGAGTGTCCGGTGTCAAACACGACTCTGACACCGACACTGGTGTGATGCAGCTCCGACACGCGTTCGACAGAAGGGACATTCGTAGCTTCAGCGGCAGGGGAACTGAGAGCAGCAAACAAAGAAGCACAACCTTGACCATTCTTCGCAAACCAGAGGAGGGTGAAAAGGATGGTGAGGAAAGCAAATTTGGGGTGGAAGGCTCGAAACAGAGAATGGAAAGAGGGAGTACTGCATTCTGCAGTAGATTTCATCTCCTACAAGTAGGGCTAATGCTTCACCCGCAGAGCTCTCCAATCTTTCTGCTTCTTCCAGATGTAGAAAGTAGAATTACTGAGCTTTAA 1548 0.4561 MDTLYNIEAIGNVKPVLLMIAVQSLYAVVNILLKLVADDGMSLSVLIAYRFIFASAFIVPVALIFERKSLQNLTGQVLFQALLCGLFGGTLLQNLYVKSLALVSAMYATAMLNLIPAVTYILSVSLRLEKSNLGTLPGMVKFLGTLTGIGGAMILTFYKGRRISIWSTHIDLVQQHAAASPHGAPTGSRLWGCMLALGTSLSYSFWLIIQTKMSKKFPWHYSIAALTSATSSILSIIYALCTERDWTQWKLGWNLRLLAAVSSGVFASGVCYPMLAWCVRRKGPLFASAFSPFMLVIVTLAGSLVLDESLHIGSLTGSVLIVSGLYMLLWGQNNETWKGETEMVSSKGLVQCDSVHVADPPLACNQREHDKKIAASVPPYTPTLSLLPSFVSSSKTSRLLFSGVSGVKHDSDTDTGVMQLRHAFDRRDIRSFSGRGTESSKQRSTTLTILRKPEEGEKDGEESKFGVEGSKQRMERGSTAFCSRFHLLQVGLMLHPQSSPIFLLLPDVESRITEL* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2041 515 PANTHER WAT1-RELATED PROTEIN 13 367 - -
Apr3g2041 515 Pfam EamA-like transporter family 190 329 IPR000620 GO:0016020|GO:0016021
Apr3g2041 515 Pfam EamA-like transporter family 15 155 IPR000620 GO:0016020|GO:0016021
Apr3g2041 515 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 161 - -
Apr3g2041 515 PANTHER WAT1-RELATED PROTEIN 13 367 IPR030184 GO:0016021|GO:0022857
Apr3g2041 515 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2041 Apr-Chr3 36398254 36405879 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2041 13 335 Nodulin-like Gene Family AT1G25270 40.798 1.50e-83 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2041 - - aprc:113859960 996.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g2041 3 36398254 36405879 Apr3g2041 3 36398254 36405879 ECH