Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2037 ATGAATGTTGTACAGAAAGTTGTGCAAGATTTCAAGCCTGTGCTGCTGATGGTATTGGTGCAGATTGCATATGCTTCTGTGAATGTGCTCTACAAGCTCGCCATTAATGATGGAATGAGCATTAGGGTAGTCATTGCCTACCGCTTGATGTTTGCAGTAGTTTTCACTTTCTCTCTGGCTCTTATTTTCGAAAGAAAGAACAGGCCGAAGCTGACATGGAGAGTGCTTTTCATGTCATTTTTTAGTGGTCTATTTGGAGGAAGTTTATTACATAACCTATTCCTTGAGGCCTTGGATCTGGTGTCAGCTACATTTGCCACTGCTGTCTATAATCTCGTTCCTGCAGTCACTTTTATGTTGGCCATCTTTTGCGGCTTGGAAAAGTTAAACATGCGAAGCTCAGCAGGAAAGGCCAAAGTGTTGGGAACGATACTAGGAATTGGCGGGTCAATGCTGCTGACGTTTTACAAAGGGCTTGAAATTAACGTTAGGAGCTTCGGCATTAATCTTTTGCAGAAAAATGGTCATGTAGCAACCTTGCATACTGACTCTGATCATAAATTTCTGGGTGTTTTGTGTGGTTTTGGAAGCTGCTTCAGTTTTGCATTATGGCTTATCATTCAGTCCAAGATGAGTAAAGAATTCCCATCTCATCACACAAGTACTGCGTTGATGTCCTTAATGGCCGCAATACAAGCCACAGCCTTTGCCCTTTATACTGAGAAGGATTGGAGCCAATGGAAGTTGGGTTCTAGTATTAGGCTTCTAACCGTCACTTATACGGGAATTGTGGCTTCCGGAGGAGCGGTTATCGTTATTGCATGGTGTGTACGGATGAGAGGCCCAATGTTTGTATCTGTTTTCAACCCTCTGATGCTTGTGCTCGTGGCTGTGGCTGATTCCTTGATGTTAGATGAGAACTTATATGTAGGGAGTGTAATTGGAGCCTTTCTAATTGTGTGCGGCGTATACATGGTGCTATGGGGTAAGAGCAAGGAAATGAAAAAGGTGAATCACTTGGTGACATCAGAAATTACCCAAGAACATGATGCAACTGAGGTTGTCATGCCCACCACCACAAATGATGACAATGGTGACTGCGTTAATAATACCAATGCCATTTGTAAGGCAATATAG 1137 0.4292 MNVVQKVVQDFKPVLLMVLVQIAYASVNVLYKLAINDGMSIRVVIAYRLMFAVVFTFSLALIFERKNRPKLTWRVLFMSFFSGLFGGSLLHNLFLEALDLVSATFATAVYNLVPAVTFMLAIFCGLEKLNMRSSAGKAKVLGTILGIGGSMLLTFYKGLEINVRSFGINLLQKNGHVATLHTDSDHKFLGVLCGFGSCFSFALWLIIQSKMSKEFPSHHTSTALMSLMAAIQATAFALYTEKDWSQWKLGSSIRLLTVTYTGIVASGGAVIVIAWCVRMRGPMFVSVFNPLMLVLVAVADSLMLDENLYVGSVIGAFLIVCGVYMVLWGKSKEMKKVNHLVTSEITQEHDATEVVMPTTTNDDNGDCVNNTNAICKAI* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2037 378 PANTHER WAT1-RELATED PROTEIN 12 359 - -
Apr3g2037 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 156 - -
Apr3g2037 378 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020|GO:0016021
Apr3g2037 378 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020|GO:0016021
Apr3g2037 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 332 - -
Apr3g2037 378 PANTHER WAT1-RELATED PROTEIN 12 359 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2037 Apr-Chr3 36368712 36371690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2037 12 350 Nodulin-like Gene Family AT1G25270 41.399 1.10e-91 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2037 - - gmx:100813812 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g2037 3 36368712 36371690 Apr3g2037 3 36368712 36371690 ECH
Apr3g2037 3 36368712 36371690 Apr1g1172 1 20247859 20253090 PCT