Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2021 ATGAAGGTCGTGGAGCAGTTGAAGAGGCTGATGAGAGTGATGTTTTCATCTATCAAATGTTTGTTTCTTCTCTGGCCTATTTTGGTTCTAGAAGTTTCTGGCAATCCAGAAGGTGATGCTCTGAGTGCATTTAAGAACAGTGTGGTTGATCCTTTAAGTGTTCTTCAAAGCTGGGATTCTTCCCTCGTCAATCCTTGCACATGGTTTCATGTTACTTGCAACAGTGACAATAGCGTGACCCGTGTTGATCTTGGAAATGCAAACCTTTCGGGTCAACTTGTTGAACAGCTTGGTCAGCTCCCAAATTTGCAATACTTGGAACTTTATAGTAATAACATAACTGGGACAATCCCAGATGAGCTTGGAAATTTGACAAAATTGGTGAGCTTGGATCTTTACTTGAACAACATAACTGGTCCCATTCCAGACAAGTTGGCCAACCTTAAAAGTCTACGTTTCTTGCGTCTCAACAATAACAGCTTGACGGGAAACATTCCTGTGAGGTTGACCACTGTTAATTCACTGCAAGTCCTTGATTTATCGAACAACAACTTGACAGGAAATGTCCCAGTCAATGGTTCTTTTTCAATGTTTACTCCTATCAGTTTTAACAATAATCCTCACTTGAATAAAACCAGTCCAGCTTCACCGTCTACTCCACAATCACAACCAGCTTCAGGTAACAGCGCTACTGGAATCATTGCTGGAGGAGTTGCTGTGGGTGCAGCACTGATGTTTGCAACCCCTGCAATTGCACTTGCTTATTCGAGAAGAAGGAGACCACAGGATTATTTCTTTGATGTTGCAGCTGAGGAGGATCCTGAAGTTCACCTTGGTCAGCTAAAAAAGTTTTCGCTGCGTGAACTGCAAGTTGCAACAGATAGCTTTAGTGGGAGAAACATTCTTGGTAGAGGTGGATTTGGCAAGGTTTATAAAGGACGCTTAACAGATGGTACTCTTGTAGCAGTAAAAAGACTTAAAGAGGAGCGCACTCAGGGTGGGGAGCTGCAATTTCAAACTGAAGTGGAAATGATCAGCATGGCTGTGCATCGAAATTTGCTTCGGCTACAAGGTTTTTGTATGACAACTACTGAACGTTTGCTTGTGTATCCTTTCATGGTTAATGGAAGTGTAGCATCGTGTTTACGAGAACGTCCAGACACACAACCACCACTTGCATGGCAAATACGAAGGCATATTGCACTAGGAGCTGCTAGAGGGCTTGCTTATTTGCATGATCATTGTGACCCAAAGATTATTCATCGTGACGTCAAAGCTGCTAATATATTATTGGATGGGGACTTTGAAGCAGTTGTTGGAGATTTTGGTTTAGCAAAGCTTATGGATTACAGAGATACTCATGTTACTACTGCTGTACGTGGCACAATTGGCCATATAGCACCAGAGTACCTCTCAACTGGAAAGTCTTCAGAGAAGACTGATGTTTTTGGATATGGTGTGATGCTTCTTGAACTTATAACTGGACAGAGGGCTTTTGATTTAGCACGACTTGCCAATGATGATGATGTCATGTTACTTGATTGGGTGAAAGCACTTCTGAAAGACAAGAGGTTGGAGACACTGGTGGATGCAGATTTACAGGGAAATTATGATGAGGAAGAGGTACAAGAGGTAATCCAAGTGGCCTTGCTATGCACACAAAGCTCCCCTGTAGAAAGACCAAAGATGTCTGAGGTGGTGAGAATGCTAGAGGGTGATGGTTTGGCAGAAAAATGGGATCAATGGTGGCAGAAAGAGGAGATGATCCGCCAAAATTACAGCTCCTCCAATCACCACACTGCTCACTGGATATTAGACTCAGCTTCAAGTATCCCACCAGATGAACTGTCAGGTCCTAGATGA 1863 0.4294 MKVVEQLKRLMRVMFSSIKCLFLLWPILVLEVSGNPEGDALSAFKNSVVDPLSVLQSWDSSLVNPCTWFHVTCNSDNSVTRVDLGNANLSGQLVEQLGQLPNLQYLELYSNNITGTIPDELGNLTKLVSLDLYLNNITGPIPDKLANLKSLRFLRLNNNSLTGNIPVRLTTVNSLQVLDLSNNNLTGNVPVNGSFSMFTPISFNNNPHLNKTSPASPSTPQSQPASGNSATGIIAGGVAVGAALMFATPAIALAYSRRRRPQDYFFDVAAEEDPEVHLGQLKKFSLRELQVATDSFSGRNILGRGGFGKVYKGRLTDGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLQGFCMTTTERLLVYPFMVNGSVASCLRERPDTQPPLAWQIRRHIALGAARGLAYLHDHCDPKIIHRDVKAANILLDGDFEAVVGDFGLAKLMDYRDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKALLKDKRLETLVDADLQGNYDEEEVQEVIQVALLCTQSSPVERPKMSEVVRMLEGDGLAEKWDQWWQKEEMIRQNYSSSNHHTAHWILDSASSIPPDELSGPR* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2021 620 Pfam Leucine rich repeat 101 161 IPR001611 GO:0005515
Apr3g2021 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Apr3g2021 620 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 22 620 - -
Apr3g2021 620 SMART serkin_6 296 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g2021 620 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Apr3g2021 620 PANTHER BNAA08G11770D PROTEIN 22 620 IPR031048 GO:0004675|GO:0005102|GO:0006468
Apr3g2021 620 Gene3D Ribonuclease Inhibitor 34 217 IPR032675 -
Apr3g2021 620 SUPERFAMILY L domain-like 37 208 - -
Apr3g2021 620 SUPERFAMILY Protein kinase-like (PK-like) 276 571 IPR011009 -
Apr3g2021 620 MobiDBLite consensus disorder prediction 206 228 - -
Apr3g2021 620 Pfam Protein tyrosine and serine/threonine kinase 300 570 IPR001245 GO:0004672|GO:0006468
Apr3g2021 620 Gene3D Transferase(Phosphotransferase) domain 1 373 591 - -
Apr3g2021 620 Gene3D Phosphorylase Kinase; domain 1 265 372 - -
Apr3g2021 620 ProSiteProfiles Protein kinase domain profile. 296 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g2021 620 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2021 Apr-Chr3 36208130 36213793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2021 8 620 Receptor kinase-like Gene Family AT4G33430 72.264 0.0 915
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Apr3g2021 Pkinase 2.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2021 K13416 - gmx:100804180 980.704