Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2019 ATGGATGCATTATCCTTAAGCTCAAGCCTAAGCATTTGCAAGCCCTCTCAATTTCATTGCCTCCCACTCTCAAGTAAGCAGCAAAGAACTTGTAATGTGAAGTTTGGTGTTTCATGCAGAGCCACAACAACACATGGAAACTTGTATAAAATGTTGTCACTGAGTCCAGGAAGTGCAACAATGGATGAGATTAAGAGAGCTTATAGATCAATGGCTCTTCAGTACCATCCTGATGTGTGCCATGATCCTTCAAGGAAAGAGGAGTCAACAAGGATGTTTGTGCAGCTAAACGCAGCTTACAAGACTTTGTCCAATCCTATGCTCCGTGCACAGTATGATACTGAATTGGGTTTGAGAAGCAAAATGAGTGTTGGTGATCATCATGAGAAATGGGGAAATGGGTTGCAAGAGCAAGTGATTGAGTTGAAGAAAAGGTCTCGTAGACGAATGGGACAAAAAGGGGGTTCATGGGGCAGCAGAATGAGGACAAAACATGAAAGATAG 504 0.4266 MDALSLSSSLSICKPSQFHCLPLSSKQQRTCNVKFGVSCRATTTHGNLYKMLSLSPGSATMDEIKRAYRSMALQYHPDVCHDPSRKEESTRMFVQLNAAYKTLSNPMLRAQYDTELGLRSKMSVGDHHEKWGNGLQEQVIELKKRSRRRMGQKGGSWGSRMRTKHER* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2019 167 ProSiteProfiles dnaJ domain profile. 47 116 IPR001623 -
Apr3g2019 167 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 3 166 - -
Apr3g2019 167 Pfam DnaJ domain 47 113 IPR001623 -
Apr3g2019 167 Gene3D DnaJ domain 34 139 IPR036869 -
Apr3g2019 167 PRINTS DnaJ domain signature 50 68 IPR001623 -
Apr3g2019 167 PRINTS DnaJ domain signature 68 83 IPR001623 -
Apr3g2019 167 PRINTS DnaJ domain signature 88 108 IPR001623 -
Apr3g2019 167 SUPERFAMILY Chaperone J-domain 40 112 IPR036869 -
Apr3g2019 167 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 3 166 - -
Apr3g2019 167 CDD DnaJ 47 105 IPR001623 -
Apr3g2019 167 MobiDBLite consensus disorder prediction 144 167 - -
Apr3g2019 167 SMART dnaj_3 46 108 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2019 Apr-Chr3 36193257 36193796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2019 49 127 C2H2 Transcription Factor Family AT1G74250 39.506 2.24e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2019 - - gmx:100811478 227.254