Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2014 ATGGGAACTAGGTCCTCTTGCACATTGCACGTGACATCTAATTTTGGAAGAAAGCAGCAGGGGACTGATCGAGAAGATAGCAATGTTACAAGTGGTGGAGAAAGTTGGCAAGTGCCAACAGGACGCAGAGATGGTCGCATCTCAAAGGCTTCGGATGTGGATTTGCCTCCCCCAACTGAGCCTGTTCATACCCACAAACACAAGTTTGCAGCAAAAGGCCTCAACACTCTTGACCTTGTCACCCTTGCAGGTGGACATAGCATTGGTACAGCATCATGTCAAGCTTTCAGCAACCGACTGTACAACTTCAATGGAAATGGTCCTGACCCTTCCATCGACCCTTCATTTCTTTCCAAACTACAAGCACAGTGCCCACAAAGCAGTGGAGCAAATAGAGTGGCTCTAGATGATGGTAGCCAAAACAAATTTGATACATCTTATTACCATAATCTAAGGAAGGGCAGAGGAATCCTTCAGTCTGATCAGGCACTGTGGACTGATGATTCAACAAAGACCATTGTGGAGAGGTACTTAGGCATAAAAGGTTTAGCTGGATTAACATTCAGTCTCCAATTTGGAAAATCTATGGTCAAGTTGAGCAACATTGAGGTCAAGACTGGGACCGATGGTGAAATTCGCAAGAAATGTTCTGCTTTCAATTAG 663 0.4495 MGTRSSCTLHVTSNFGRKQQGTDREDSNVTSGGESWQVPTGRRDGRISKASDVDLPPPTEPVHTHKHKFAAKGLNTLDLVTLAGGHSIGTASCQAFSNRLYNFNGNGPDPSIDPSFLSKLQAQCPQSSGANRVALDDGSQNKFDTSYYHNLRKGRGILQSDQALWTDDSTKTIVERYLGIKGLAGLTFSLQFGKSMVKLSNIEVKTGTDGEIRKKCSAFN* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2014 220 Pfam Peroxidase 26 177 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr3g2014 220 ProSitePatterns Peroxidases proximal heme-ligand signature. 78 88 IPR019793 -
Apr3g2014 220 Gene3D Peroxidase, domain 2 56 199 - -
Apr3g2014 220 PRINTS Plant peroxidase signature 32 47 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr3g2014 220 PRINTS Plant peroxidase signature 77 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr3g2014 220 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr3g2014 220 PRINTS Plant peroxidase signature 150 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr3g2014 220 PRINTS Plant peroxidase signature 194 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr3g2014 220 ProSiteProfiles Plant heme peroxidase family profile. 24 220 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr3g2014 220 PANTHER PEROXIDASE 26 218 - -
Apr3g2014 220 SUPERFAMILY Heme-dependent peroxidases 26 220 IPR010255 GO:0004601|GO:0006979|GO:0020037
Apr3g2014 220 PANTHER PEROXIDASE 25-RELATED 26 218 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr3g2014 220 MobiDBLite consensus disorder prediction 1 18 - -
Apr3g2014 220 MobiDBLite consensus disorder prediction 1 64 - -
Apr3g2014 220 PRINTS Haem peroxidase superfamily signature 32 44 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr3g2014 220 PRINTS Haem peroxidase superfamily signature 78 93 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr3g2014 220 PRINTS Haem peroxidase superfamily signature 136 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2014 Apr-Chr3 36166434 36172266 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2014 26 220 Peroxidase AT5G64100 58.673 3.17e-76 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2014 K00430 - gmx:100789782 276.944