Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2001 ATGCGAAACCCTAAAATTAAAACACCGCATTCGATGGGTGAAGATGGCGATCCTGGGAGCGCAATGTCCAGCGAATCGAGGTGGGTTTTCCAGGAGGATGAGGATCCCTCCGAGATTGAAGACTTCGACGCTGCTGATTTGCGGCAGCAGCCTATGTTCGATTCTGAGGACGAGGATAATGCTGAGCAGAAACTCGTTCGCACTGGCCCACGAATCGATTCCTTCGATGTCGAAGCTCTTGAAGTGCCTGGTGCTCAGAGAAATGACTATGAGGATATTAGCATGGGAAAACAAATTGTGTTGGCTTTTCAAACTCTTGGTGTTGTCTTTGGTGATGTTGGAACAAGTCCTTTGTATACCTTCAGTGTTATGTTTAGGAAGGCTCCTATTAATGGAAATGAAGACATTCTTGGAGCATTGTCACTTGTTTTGTACACTTTAATCTTGATTCCATTAGTGAAGTATGTCCTTGTTGTTCTTTGGGCCAATGATGACGGTGAAGGTGGTACGTTTGCCTTGTATTCCTTGATTTGTCGTAATGCTAAGGTGAGTCTTCTTCCTAATCAGTTGCCATCAGATGCCCGAATATCAGGCTTTAGGCTAAAGGTTCCATCTCCCGAGCTTGAAAGGTCTTTAAAAATCAAGGAAAGGCTAGAGACTTCTGTGACTCTGAAGAAGATTCTGCTGTTATTAGTTCTTGCTGGTACTTCCATGGTGATAGCTAATGGGGTTGTTACACCAGCAATGTCAGTACTATCCTCTGTTAATGGTTTGAAAGTTGGGGTAGATGCAATTAAGCAAGATGAAGTGGTGATGATTTCTGTTGCTTGCCTTGTCATTTTGTTCAGTGTACAGAAGTATGGAACAAGTAAAGTGGGGCTCGCCGTAGGACCTGCTTTGTTTATATGGTTTTGTTCTCTTGCGGGGATTGGTATATACAACCTTGTCAAGTATGACAGCAGTGTCTTCAGGGCATTTAATCCTATTTACATATATTATTTCTTTGCAAGGAATCCAACTAAAGCATGGTATTCTCTCGGGGGCTGTCTTCTGTGTGCAACTGGCTCTGAGGCCATGTTTGCAGATCTTTGCTATTTCTCTGTACGATCAGTTCAGCTTACATTTGTATTTCTTGTTTTACCGTGCCTACTGTTGGGTTATTTGGGTCAAGCTGCATACCTCATGGAAAACCATGCTGATGCTGGTCAAGCCTTTTATTCTTCTGTTCCAAGTGGGGCGTTCTGGCCAACTTTCCTCATTGCTAACGTTGCTGCATTAATTGCAAGTCGGGCTATGACAACAGCCACATTTTCGTGTATAAAACAGTCAACAGCACTTGGTTGTTTCCCTCGTCTTAAAATATTTCATACCTCTCGGAAATTTATGGGCCAGATCTATATCCCGGTTATAAACTGGTTTCTCTTGGCTGTTTCTTTGGTGTTTGTCTGCTCTATATCCAGCATTGATGAGATAGGAAATGCATATGGCATTGCTGAGCTGGGGGTGATGATGATGACCACTATTTTAGTAACTCTTGTAATGCTGCTTATATGGCAGATACACATCATCATAGTGCTAAGTTTCGTGGTAGTCTTTTTGGGATTGGAGTTGACTTTCTTTTCATCAGTTTTGTGGAGTGTAACAGATGGAAGCTGGATTATATTAGTCTTTGCCGTAATAATGTTTTTTATAATGTTTGTATGGAATTATGGAAGCAAGCTCAAGTATGAAACTGAAGTAAAGCAAAAGCTGTCAATGGATTTAATGCGAGAATTAGGCTGCAATCTTGGGACAATACGAGCTCCTGGGATTGGTTTGCTCTATAATGAGTTGGTTAAAGGAATTCCTGGCATTTTTGGCCATTTTCTAACCACACTTCCAGCAATTCACTCCATGATCATATTTGTGAGTATTAAGTATGTTCCAGTTTCCATGGTGCCTCAAAGTGAAAGGTTCCTTTTTGGGCGAGTTTGCGCTAGAAGCTATCATATATTTCGTTGTATTGCCAGGTATGGTTACAAAGATGTTCGCAAAGAAAATCACCAAACTTTTGAGCAACTGCTGATGGAGAGCCTAGAGAAGTTTATACGTCGTGAGGCTCAGGAGAGGTCACTTGAGAGTGAGGGGGATGATGATACCGACTCAGAGGATGAGTACTCTGGTTCTAGGGTTCTCATAGCTCCCAATGGGAGTGTTTATTCACTTTGTGTTCCTCTTCTGGCTGAAATTAATGATACTAGCAAGCCCGATTTTGAAGCAAGCACATCTGAGGAGGCGAGTCCAGCGTCTCCAAAACCCCCAGTGGTTGATGCAGAGCAGAGTCTTGAAAGAGAGTTATCTTTTATACGCAAGGCTAAAGAATCTGGAGTTGTTTATCTTCTTGGTCATGGGGATATAAGGGCAAGAAAAGACTCTTGGTTTATCAAGAAGCTAATTATAAACTATTTTTATGCCTGTCTGAGAAAGAACTGCAGAAGGGGAATCACAAATTTAAGTGTACCTCATTCCCAACTGATGCAAGTTGGCATGACGTACATGGTTTGA 2544 0.4206 MRNPKIKTPHSMGEDGDPGSAMSSESRWVFQEDEDPSEIEDFDAADLRQQPMFDSEDEDNAEQKLVRTGPRIDSFDVEALEVPGAQRNDYEDISMGKQIVLAFQTLGVVFGDVGTSPLYTFSVMFRKAPINGNEDILGALSLVLYTLILIPLVKYVLVVLWANDDGEGGTFALYSLICRNAKVSLLPNQLPSDARISGFRLKVPSPELERSLKIKERLETSVTLKKILLLLVLAGTSMVIANGVVTPAMSVLSSVNGLKVGVDAIKQDEVVMISVACLVILFSVQKYGTSKVGLAVGPALFIWFCSLAGIGIYNLVKYDSSVFRAFNPIYIYYFFARNPTKAWYSLGGCLLCATGSEAMFADLCYFSVRSVQLTFVFLVLPCLLLGYLGQAAYLMENHADAGQAFYSSVPSGAFWPTFLIANVAALIASRAMTTATFSCIKQSTALGCFPRLKIFHTSRKFMGQIYIPVINWFLLAVSLVFVCSISSIDEIGNAYGIAELGVMMMTTILVTLVMLLIWQIHIIIVLSFVVVFLGLELTFFSSVLWSVTDGSWIILVFAVIMFFIMFVWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPGIFGHFLTTLPAIHSMIIFVSIKYVPVSMVPQSERFLFGRVCARSYHIFRCIARYGYKDVRKENHQTFEQLLMESLEKFIRREAQERSLESEGDDDTDSEDEYSGSRVLIAPNGSVYSLCVPLLAEINDTSKPDFEASTSEEASPASPKPPVVDAEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLIINYFYACLRKNCRRGITNLSVPHSQLMQVGMTYMV* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2001 847 MobiDBLite consensus disorder prediction 749 770 - -
Apr3g2001 847 PANTHER POTASSIUM TRANSPORTER 25 846 - -
Apr3g2001 847 Pfam K+ potassium transporter 102 675 IPR003855 GO:0015079|GO:0016020|GO:0071805
Apr3g2001 847 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 25 846 IPR003855 GO:0015079|GO:0016020|GO:0071805
Apr3g2001 847 MobiDBLite consensus disorder prediction 1 37 - -
Apr3g2001 847 TIGRFAM kup: potassium uptake protein 101 847 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2001 Apr-Chr3 36070552 36079063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2001 5 847 Inorganic Solute Cotransporters AT5G09400 77.476 0.0 1297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2001 - - gmx:100803841 1459.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g2001 3 36070552 36079063 Apr1g1213 1 20757187 20763104 PCT