Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1997 ATGGCGGAGCGTGCTTCTTACGGATTGGGACCTCGATTAGATATTCAGCAATTACAATTTGAAGCCCAGCATCGGTGGCTGCGTCCTGCAGAAATATGTGAAATTCTTCGCAATTATCGAATGTTTCAGATCACATCAGAACCGCCTAACAGGCCACCAAGTGGTTCCCTTTTTCTTTTTGATCGGAAGGTTTTAAGGTACTTTAGAAAGGATGGACATAATTGGAGAAAGAAAAAAGATGGAAAGACTGTGAAGGAGGCTCATGAGAAGTTAAAGGTGGGAAGTGTTGATGTGTTACATTGCTACTATGCCCATGGAGAAGAAAATGAAAATTTTCAGAGGCGAAGCTATTGGATGCTTGAACAGGATATGATGCATATTGTATTTGTCCACTACTTGGATGTTAAGGTCAACAAAACCAATATTGGTGGAAGTACAGATACTAGCGAGGCTACATCAGATTCCCAGAAGAGCAGTTCTTTGTCATCTGGCTTTCCCAGAAATTATGGAGGTATGCCTTCAAGAAGTACCGATTCCATGAGCCCAACTAGCACTTTGACATCTTTATGTGAAGATGCTGATTCAGAGGATATTCACCAAGCAAGTTCTGGATTACACTCTCATCATGAATCACAATATTTGGGGAATGGTCGTCCGATGGATAAGATTGACGCTTGTTCAAATAGTTCATATCTTGTGCTTCCATTTTCAGGTGATCATGGACAGGTACCAATTTCTGGAACAGATTATATGCCACTTGTTCAGGGGGACAAATCTAGAGCCAGTGATACTACGTACATTGAGGGCAAAAAATCCTGGGACAATGCCATGGAGCAATCTTCAGGAGTGCATACTGATCCTTCTCTTGTTTCATCTAGATCCATTCCATCAAGCTCACTGGGAAACATTCTTGAAGGAGATCATACTGTTCTGTGCAGCCTTTTAGGGCATAAAAATGTCCTCACTGAAGACGAAAGTGGCTCTCATCCTCTCCAATCAAATTGGCAGATTTCTTTTGAAGACAATACAGGAGAATTGCCTAAATGGGGCTTCGCTGCATTTGGATCTGAGTATACTGGTTTACTGGGGGAAGAAACTAATGATGCATGTCCAGAAATTGTTCCTGAGCTCTTCACTTTTAATGATGAGCCGAAGGAGCAGTCTGTGCAGCAAAACTTCTCGAAGCAGTATGCACATACACAATCTAATCCTGCACAGAAATCCAATTCTGAGGGTGAAGTTCCTGGTGATGAGAGTGTCAACTCCACCTTGACCATGAAACGTGCATTCTTGGGCGGAGAGGAGAGCCTACAGAAGGTTGATAGCTTCTCCAGGTGGATTACTAAAGAACTTGCAGGAGTGGATGATCTGCATATGCAGTCTTCCCCTGGTATTTCATGGAGCACTGATGAATGTGGGCATGTGATAGATGACACCTCACTGAAACTGTCCCTGTCTCAAGACCAGCTCTTCAGTATAAATGATTTTTCACCTAAATGGACTTATGCTGAATCTGAAATTGAGGTGTTGATTATTGGAACATTTTTGAAGAGTCAACCTGAGGTGGCAACATGTAAGTGGTCCTGTATGTTTGGGGAAGTGGAGGTTCCTGCTGAGGTTTTAGCTAATGGAATTCTGTGCTGTCAAGCTCCATCTCTTAACATTGGACAGGCTTTTGAGGATAATATGGAGAAAAGAAACTTAATTTTCAAGCTTATTTCGCTGAAAGAGGAAGAAGAATATTCAAGTAAAGAAGAGCCAACTGCAGAGACAGATATATCAAAACACAAGTTGAAGGAGATGTTTCACAGGCAGGTTAAAGAGAAGTTGTACTCATGGCTTCTTCACAAAGTGACTGAAACTGGTAAAGGGCCTAATGTATTGGGTGAGAATGGGCAAGGCGTGTTACATTTAGTTGCTGCTCTTGGTTATGATTGGGCCATAACACCAATCATAACTGCTGGAGTGAATATCAACTTCCGTGATGTGAATGGATGGACAGCACTACACTGGGCTGCATCCTGTGGCAGAGAGCGAACAGTTGCTATCCTTGTCACCATGGGTGCAGCCACTGGAGCTCTGACAGACCCATCCCCAGCATTTCCTTCAGGTAGATCACCTGCAGATCTTGCTTCTAGCAACGGCCACAAAGGAATTTCTGGTTTTCTTGGAGAGTCATTATTAACTAGCCACGAGTCATTATTAACTAGCCACCTCGAATCACTCACAATGGATGAAAATAAAGATAGTAGGAAAGAAGCTTCAGGAATGAAAGCTGTGCATACAGTTTTTGAGCGAATTGCAACACCTGTGCGTTATGGTGATATACCAGATGCTATCTGCCTTAAGGATTCTCTAAATGCTGTTCGTAATGCTACACAAGCTGCTGATCGCATACATCAAGTATTCAGAATGCAGTCATTCCAGAGGAAACAGTTAGCTCAATGTGAAGATGATGAATTTGGATTGTGGGATCAACAAGCTCTTTCCCTTCTAGCTTCTAAGGCTTGCAAATCTGGACAAGGAGGTGGTTTAGCCAATGCTGCTGCGGTACAAATACAGAAAAAGTTCCGTGGTTGGAAGAAGAGAAAAGAATTCTTGATCATTCGTCAAAGAATTGTTAAAATCCAGGCCCACGTAAGAGGTCACCAGGTAAGAAAGCAGTTTAAATCAATCATTTGGTCCGTGGGAATCCTGGAGAAGGTCATATTACGGTGGAGGCGCAAGGGCAGTGGTTTACGTGGATTTCGACGAGATGCCCTTAATAAGGTCCCCGACCAACCAAGCGATTCTTTGAAAGAGGATGATTATGATTTTCTGAAGGAAGGAAGGAAACAAAGTGAAGCAAGGTTCCAAAAGGCCCTTTCACGGGTGAAGTCCATGGTTCAGTATCCAGAGGCACGGGCTCAATACCGGCGGCTGCTAAATGTAGTAGAAGACTTCCGTGAAACCAAGGGAGGTAATTTGAATTTGGTAAATTCGGAAGAGACTGTTGATGGTGTGGAGGATTTGATTGATATTGACATGCTTTTAGATGATGAAAATTTCTTGCCCATAGCATTCGATTGA 3069 0.4282 MAERASYGLGPRLDIQQLQFEAQHRWLRPAEICEILRNYRMFQITSEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWMLEQDMMHIVFVHYLDVKVNKTNIGGSTDTSEATSDSQKSSSLSSGFPRNYGGMPSRSTDSMSPTSTLTSLCEDADSEDIHQASSGLHSHHESQYLGNGRPMDKIDACSNSSYLVLPFSGDHGQVPISGTDYMPLVQGDKSRASDTTYIEGKKSWDNAMEQSSGVHTDPSLVSSRSIPSSSLGNILEGDHTVLCSLLGHKNVLTEDESGSHPLQSNWQISFEDNTGELPKWGFAAFGSEYTGLLGEETNDACPEIVPELFTFNDEPKEQSVQQNFSKQYAHTQSNPAQKSNSEGEVPGDESVNSTLTMKRAFLGGEESLQKVDSFSRWITKELAGVDDLHMQSSPGISWSTDECGHVIDDTSLKLSLSQDQLFSINDFSPKWTYAESEIEVLIIGTFLKSQPEVATCKWSCMFGEVEVPAEVLANGILCCQAPSLNIGQAFEDNMEKRNLIFKLISLKEEEEYSSKEEPTAETDISKHKLKEMFHRQVKEKLYSWLLHKVTETGKGPNVLGENGQGVLHLVAALGYDWAITPIITAGVNINFRDVNGWTALHWAASCGRERTVAILVTMGAATGALTDPSPAFPSGRSPADLASSNGHKGISGFLGESLLTSHESLLTSHLESLTMDENKDSRKEASGMKAVHTVFERIATPVRYGDIPDAICLKDSLNAVRNATQAADRIHQVFRMQSFQRKQLAQCEDDEFGLWDQQALSLLASKACKSGQGGGLANAAAVQIQKKFRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKQFKSIIWSVGILEKVILRWRRKGSGLRGFRRDALNKVPDQPSDSLKEDDYDFLKEGRKQSEARFQKALSRVKSMVQYPEARAQYRRLLNVVEDFRETKGGNLNLVNSEETVDGVEDLIDIDMLLDDENFLPIAFD* 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1997 1022 ProSiteProfiles Ankyrin repeat profile. 664 696 IPR002110 GO:0005515
Apr3g1997 1022 ProSiteProfiles IQ motif profile. 846 875 IPR000048 GO:0005515
Apr3g1997 1022 MobiDBLite consensus disorder prediction 389 419 - -
Apr3g1997 1022 Pfam IQ calmodulin-binding motif 871 890 IPR000048 GO:0005515
Apr3g1997 1022 Pfam IQ calmodulin-binding motif 848 866 IPR000048 GO:0005515
Apr3g1997 1022 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Apr3g1997 1022 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 847 896 IPR027417 -
Apr3g1997 1022 Gene3D - 565 720 IPR036770 -
Apr3g1997 1022 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 1 557 - -
Apr3g1997 1022 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 556 1022 - -
Apr3g1997 1022 SMART CG_1_2 18 136 IPR005559 GO:0003677
Apr3g1997 1022 SMART iq_5 845 867 IPR000048 GO:0005515
Apr3g1997 1022 SMART iq_5 868 890 IPR000048 GO:0005515
Apr3g1997 1022 MobiDBLite consensus disorder prediction 145 187 - -
Apr3g1997 1022 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Apr3g1997 1022 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 557 - -
Apr3g1997 1022 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 556 1022 - -
Apr3g1997 1022 ProSiteProfiles Ankyrin repeat region circular profile. 664 689 - -
Apr3g1997 1022 ProSiteProfiles IQ motif profile. 869 893 IPR000048 GO:0005515
Apr3g1997 1022 Gene3D - 846 893 - -
Apr3g1997 1022 SUPERFAMILY E set domains 493 556 IPR014756 -
Apr3g1997 1022 Gene3D Immunoglobulins 486 560 IPR013783 -
Apr3g1997 1022 SUPERFAMILY Ankyrin repeat 619 723 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1997 Apr-Chr3 36016439 36031222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1997 1 1003 CAMTA Transcription Factor Family AT5G64220 48.131 0.0 897
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Apr3g1997 CG-1 1.7e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1997 K21596 - gmx:100797717 1601.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1997 3 36016439 36031222 Apr1g1215 1 20773959 20784545 PCT