Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1994 ATGGGATACGAGAATGCAAACCTCACCATTGAAAAGGATGTTAAATTCATCAAACCTTCAAAACCCACTCCTACCACCATTCTTTCACTCTCTACCATCGACAATTTTCTCTCCCCCAATTTCTTCACCCAAAGCATCCATTTATATAGATCCATAAATCACAGTTCCAAACTTGAACCTGCACGTGTGATCAAAGAGGCCCTCTCAAAGGCTCTGTTTTACTATTACCCTTTTGCAGGAAAGCTAGTAAGACACGCTGATGGAAAGCTCAGAGTCCATTGCACCTCCGATGGAGTTCCATTCATAGAAGCTATTTGTCACTGCGACCTCTCATCTCTTAATTACCTAGACGACAATGATGTTGAAATTGGAAAAAACTTATCGCTTGATTTTCCTTCTCACGATGAATTTGGTAATCAATACCCTTTGGTTTTAATGATGACGAAATTTCTATGTGGGGGTTTTGCAATTGTTATTGGTTCTTCACATGCCATTGTTGATGGGAGTGGGATGGCTCAGTTCTTACGAGCCGTGGCTGAACTTGCAAGTGGAAAAACCGAGCCTTCTCTGAAACCTGTGTGGGAAAGAGAGAGACTAGTAGGCACAATAACCAGTGAACCGATGCAAAGCCCAGTAAGCGACGAGGGCTCTATTGCCGTTTCACCGTTTATGCCAACCATGGATTTTTCACACGAATGCTCCAAGATAGACGGTGACAGCATAAATAGACTTAAGACGAGTTTGAAGATAAACAGCGAAGTAATTACTAAGATGACAGCGAAAGGGTTTACCACTTTTGAGTCCCTCACTGCGTACATTTGGAGGGCAAGAGCAAGAGCCTTGAAACTAAGCTACGATAGGAAAACTATGCTAATTATCGTAGTTAGTGTGAAACCGCACTTACTTGATCCTTTGCCTGAGGGGTATTATGGGAATAGCCTTGTGCAGTCATATGTTGTGCAAACAGTGAGGGAGCTAAATGAGAAACCGCTGTTAGAGGTTGTGAAGCTGGTGAGAGAGAGCATAAGGAATGCTTTTACCAACGATTATATCAGACACTCGATCAATACTATGGAAACGAAATCGATGAAACATGATTATGAGAGTGGGGCTGTAACGGTGGTGACAGATTGGAGACATTTGGGTTTCTTCGAAAAGGTTGATTTTGGGTGGAAGGAGAAGCCAGTGAATAACATGCCAGTTCCTTGTGACATGTATGGAGCTTTGGGTTTGTGTTCCATCTTGTCTCCAACTAATTTGGATCCTTCAATGAATGGAGGAGCGAGGGTTTACACATCCTTGCCTCGTCTTGCCATGCCCAAATTCAAGCAGGAGATGGACAACCTTAGGCATATCGAAAATGCCTAG 1368 0.4298 MGYENANLTIEKDVKFIKPSKPTPTTILSLSTIDNFLSPNFFTQSIHLYRSINHSSKLEPARVIKEALSKALFYYYPFAGKLVRHADGKLRVHCTSDGVPFIEAICHCDLSSLNYLDDNDVEIGKNLSLDFPSHDEFGNQYPLVLMMTKFLCGGFAIVIGSSHAIVDGSGMAQFLRAVAELASGKTEPSLKPVWERERLVGTITSEPMQSPVSDEGSIAVSPFMPTMDFSHECSKIDGDSINRLKTSLKINSEVITKMTAKGFTTFESLTAYIWRARARALKLSYDRKTMLIIVVSVKPHLLDPLPEGYYGNSLVQSYVVQTVRELNEKPLLEVVKLVRESIRNAFTNDYIRHSINTMETKSMKHDYESGAVTVVTDWRHLGFFEKVDFGWKEKPVNNMPVPCDMYGALGLCSILSPTNLDPSMNGGARVYTSLPRLAMPKFKQEMDNLRHIENA* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1994 455 Gene3D - 9 210 IPR023213 -
Apr3g1994 455 PANTHER ACYL TRANSFERASE 4 6 450 - -
Apr3g1994 455 Gene3D - 225 446 IPR023213 -
Apr3g1994 455 Pfam Transferase family 15 448 - -
Apr3g1994 455 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1994 Apr-Chr3 35981942 35984939 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1994 12 419 Monolignol Biosynthesis Gene Families AT5G48930 27.700 6.62e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1994 K20240 - gmx:100783730 635.18