Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1986 ATGGCTTCCTTTCTTCCATCTCTGGAACGTTCTTCTAGTGCTAGTGATTCTGAAACTAAACACTATTCAAGTTCAAAATCAGTGCTACACCAAACTGTCCTAGACATTGAGGCCACAACACCGGAGATAGAAACATTTAGTGCTCCAGAAAGGAGCATTGGAGGAGGAGAAGCTTCAGGTTTGAATGATCAGATAGAAGAAATGGGTATCTGCTTGACATGGAAGGATCTATGGGTGACTGCTTCAATGGGAAAAAATGGAAGCAAATCAATTCTTCAGGGTCTAACTGGTTATGCTAAACCAGGACAGCTATTGGCCATCATGGGTCCTTCTGGTTGTGGAAAGTCAACACTTCTTGATGCTTTAGCAGGGAGATTAGGTTCAAACACAAGGAAAACTGGGGAGATTCTGATCAATGGAAAGAAACAAGTCTTGGCTTATGGAACTTCAGCATATGTCACACAAGATGATACCTTATTGACAACCTTAACGGTCGGAGAAGCAGTGCACTATTCAGCTCAGCTCCAGTTGCCTGACACCATGTCCAAAAAAGAGAAGAAAGACAGAGCAGATTTTACAATTAGAGAAATGGGTCTACAAGATGCCATTAACACAAGAATTGGAGGATGGGGTGTTAAAGGTATTAGTGGGGGTCAGAAGAGGCGAGTTAGCATCTGTATTGAGATCCTAACACGCCCTAAACTTCTGTTCCTTGATGAACCGACTAGTGGACTAGACAGTGCAGCTTCCTATTATGTCATGAGCAGAATAGCTACCCTGGATAAAAAAGATGGCATTCAAAGGACTGTTGCTGCGTCTATCCATCAGCCTAGTAGTGAAGTTTTTCAACTTTTCGACAACCTTTGTCTTCTGTCTTCGGGTAGAACAGTTTACTTTGGACCTGCTTCTGCTGCACGTGAGTTTTTTGCTTCAAATGGTTTTCCTTGTCCTGCTCTCATGAACCCATCTGATCATTTACTGAAAACCATAAACAAGGATTTCGATCAGGACATTGAGTTGGTTTTAGGAGGGACAAAAACAATACCCACAGAAGAAGCAATTCATACCCTTGTGAATTCATATAAATCATCTGAAATGAACCAACAAGTCCAAAAAGAAGTAGCAGTACTATCTGAAAAGGACAACAGTTCAACAAACAAGAAGAGAAGTCATGCTAGCTTCCTTAATCAGTGCTTAGCCCTCACCGAAAGATCATCCATTAACATGTTTCGTGATCTAGGATATTATTGGTTACGCCTTGCCATATATATTGCATTGGCAATAAGTTTAGCCACTATTTTCTATGATCTGGATACAAGTTATCGCTCAATTCAGGACAGAGGTTCATTTCTCATGTTTGTGTCTTCATTCATGACTTTCATGACCATTGGTGGATTCCCTTCCTTTGTGGAGGACATGAAGGTGTTTGAACGGGAAAGACTAAACGGGCACTATGGTGTTACTGCATTTGTCATTGGTAACACCTTTTCAGCTATCCCATACTTGTTGCTGGTTTCACTCATTCCTGGAGCTATAGCCTATTACCTTCCTGGTCTTCAGAGAGGATTTGAGCACTTTCTATACTTTTTTTGTGTTCTATTTGCTTGTCTGATGTTGGTAGAGAGCCTTATGATGATTGTTGCTAGCATAGTCCCTAACTTTCTAATGGGTATCATAACTGGTGCTGGAATTCAAGGAATCATGATTTTGGGTGGTGGGTTCTTTCGATTGCCAAAGGATCTTCCTGGGCCATTTTGGAGATACCCAATGTTCTATGTTGCATTTCATAGATATGCCTACCAAGGAATGTTCAAAAATGAGTTTGAAGGACTTACGTTTCCTAAAAGTGAAGTTGATAATGGCTCGTACATTAGTGGTGAAGAGATTCTTAGAAATACATGGCAAGTAAACATGAGTTACTCAAAGTGGGTTGATCTTGCAATCTTGTTGGGGATGATTGTTCTGTATCGAGTTCTATTTTTGGTTATCATCAAAACTACTGAGAAGGTAAAGCCCATTGTTGTATCATTCATGTCAGGGTCTCCCAAGCGAACAATACAGATCATGGAGAATCCCAATGCCACTCCTTTACATTGA 2097 0.4077 MASFLPSLERSSSASDSETKHYSSSKSVLHQTVLDIEATTPEIETFSAPERSIGGGEASGLNDQIEEMGICLTWKDLWVTASMGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDALAGRLGSNTRKTGEILINGKKQVLAYGTSAYVTQDDTLLTTLTVGEAVHYSAQLQLPDTMSKKEKKDRADFTIREMGLQDAINTRIGGWGVKGISGGQKRRVSICIEILTRPKLLFLDEPTSGLDSAASYYVMSRIATLDKKDGIQRTVAASIHQPSSEVFQLFDNLCLLSSGRTVYFGPASAAREFFASNGFPCPALMNPSDHLLKTINKDFDQDIELVLGGTKTIPTEEAIHTLVNSYKSSEMNQQVQKEVAVLSEKDNSSTNKKRSHASFLNQCLALTERSSINMFRDLGYYWLRLAIYIALAISLATIFYDLDTSYRSIQDRGSFLMFVSSFMTFMTIGGFPSFVEDMKVFERERLNGHYGVTAFVIGNTFSAIPYLLLVSLIPGAIAYYLPGLQRGFEHFLYFFCVLFACLMLVESLMMIVASIVPNFLMGIITGAGIQGIMILGGGFFRLPKDLPGPFWRYPMFYVAFHRYAYQGMFKNEFEGLTFPKSEVDNGSYISGEEILRNTWQVNMSYSKWVDLAILLGMIVLYRVLFLVIIKTTEKVKPIVVSFMSGSPKRTIQIMENPNATPLH* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1986 698 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 72 318 IPR003439 GO:0005524
Apr3g1986 698 ProSitePatterns ABC transporters family signature. 215 229 IPR017871 GO:0005524
Apr3g1986 698 MobiDBLite consensus disorder prediction 1 22 - -
Apr3g1986 698 Gene3D - 72 310 IPR027417 -
Apr3g1986 698 Pfam ABC-2 type transporter 397 608 IPR013525 GO:0016020|GO:0140359
Apr3g1986 698 MobiDBLite consensus disorder prediction 40 59 - -
Apr3g1986 698 Pfam ABC transporter 93 243 IPR003439 GO:0005524
Apr3g1986 698 SMART AAA_5 101 344 IPR003593 -
Apr3g1986 698 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 309 IPR027417 -
Apr3g1986 698 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 24 698 - -
Apr3g1986 698 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 24 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1986 Apr-Chr3 35918351 35921705 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1986 91 253 Calmodulin-binding Proteins AT2G36910 30.178 2.69e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1986 K05681 - gmx:100813462 1101.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1986 3 35918351 35921705 Apr3g1986 3 35918351 35921705 ECH