Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1985 ATGGAAACATGTAGCACAGCAAGGAGGACCATTAAACAAGTTTCAGGTTGCAACAATCATGCAGAAGAAGTGGGTATCTGCTTGACATGGAAGGATCTATGGGTAATTTCTTCAATGGGAAAGAATGGAAGCAAATCAATTCTTCAGGGTCTAACTGGTTTTGCCAAACCAGGGCAACTCTTGGCCATAATGGGTCCCTCTGGCTGTGGCAAATCTACACTTCTTGATACTTTAGCAGGGAGATTAGGTTCAAACATAAGGCAAACAGGGGAAATTCTGATCAATGGTCACAAACAAGCATTGTCTTATGGAACCTCGGCATATGTCACACAAGATGATACCTTATTGACAACCTTAACGGTCGGAGAAGCAGTGCACTATTCAGCTCAGCTCCAATTGCCTGATACCATGTCCAAAAAAGAGAAGAAAGAGAGAGCAGATTTTACAATTAGAGAAATGGGTCTACAAGATGCCATTAACACAAGAATTGGAGGATGGGGTTGTAAGGGTATTAGTGGGGGTCAGATGAGGCGAGTGAGTATTTGTATTGAGATCCTAACTCGCCCTAAACTTCTCTTTCTTGATGAACCAACTAGTGGACTAGACAGTGCAGCTTCCTATTATGTCATGAAAAGAATCTCTACTCTTGCACAAAATGATAATACTCAAAGGACTGTTATTGCTTCAATTCATCAGCCTAGTAGTGAAGTTTTTCAACTTTTCGACAACCTTTGTCTTCTGTCTTCTGGAAGAACAGTTTACTTTGGACCTGCTTCAGCCGCAAGTGAGTTTTTCGCATCAAATGGTTTTCCTTGTGCTGCTCTCATGAATCCATCTGATCATTTACTTAAAACTATAAACAAGGATTTCGATCAGGACATTGTGGCGGGCTTAGCAGGGACTCGTACAATACCCACAGAGGAAGCAATTCGTATCCTTGTAAGCTCATATAAAACATCTGAAAGGAACCAACAAGTTCAAAACGAAGTAGCAGTACTATCTCAAAAGGTATATATATATATTATATATATCGATGCTGATATAGCAAATACCTACAAAAAGAGAGAGCATGCAGGCTTTCTTAATCAATGGTTAGTTCTCACCAAAAGATCGTTCGTGAACATGTATCGTGATCTGGGTTATTACTGGTTGCGCCTTGCCATATATATTGCTTTGGCCATAGCCTTAGCCAGTGTTTACTATGATCTGGGTACAAGTTATGCCTCAATTCGGGATCGAGGTTCACTAGTGGCGTTTATAAATGGATTCTTAACTTTCATGAGCATTGGTGGATTCCCTTCCTTTGTGGAAGTCATGAAGGTATTTCAACGAGAAAGACAAAATGGGCATTATGGTGTTACTGCATTTGTCATTGGGAACACGTTATCATCCCTCCCATATTTGTTATTGGTTACATTCATTCCTGGGGCCATTACCTATTACCTTCCTGGACTTCAGAAAGGGTTCGATCATTTTATGTACTTCATTTGTGCTTTATTTTCTAGTCTCATGTTAGTGGAGAGCCTTATGATGATAGTTGCTAGCATAGTCCCCAACTTTCTAATGGGCATCGTAACCGGTGCTGGAATTCAAGGAGTGATGCTTTTACTTGGTGGGTTCTTTAAATTGCCAAATAATCTTCCTAAGCCAGTTTGGAGATACCCATTGCACTACGTTGCTTTTCATACGTTTGCCAACCAAGGACTGTTCAAAAATGAATATGAAGGACTAAGATTTACTACAGATCAAGTTGGAGGAGGCTCACACAATTACATTAGTGGGGAAGAGGTTCTAAGAAACACATGGCAAGCTGACATGAGTTACTCAAAGTGGGTTGATCTTGCAATTTTGCTAAGCATGATTGTTGTCTATCGAGTTTTATTCTTGGTGATAATCAAGATTACTGAGAAGTTGAAGCCCATTATCGTATCATTATCGTGCATGTTATTGTCTCCCAAGCAAACAGTACAGATCGTGGAGAACCCCAATGCCACGCCTTTACATTGA 2007 0.4036 METCSTARRTIKQVSGCNNHAEEVGICLTWKDLWVISSMGKNGSKSILQGLTGFAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSNIRQTGEILINGHKQALSYGTSAYVTQDDTLLTTLTVGEAVHYSAQLQLPDTMSKKEKKERADFTIREMGLQDAINTRIGGWGCKGISGGQMRRVSICIEILTRPKLLFLDEPTSGLDSAASYYVMKRISTLAQNDNTQRTVIASIHQPSSEVFQLFDNLCLLSSGRTVYFGPASAASEFFASNGFPCAALMNPSDHLLKTINKDFDQDIVAGLAGTRTIPTEEAIRILVSSYKTSERNQQVQNEVAVLSQKVYIYIIYIDADIANTYKKREHAGFLNQWLVLTKRSFVNMYRDLGYYWLRLAIYIALAIALASVYYDLGTSYASIRDRGSLVAFINGFLTFMSIGGFPSFVEVMKVFQRERQNGHYGVTAFVIGNTLSSLPYLLLVTFIPGAITYYLPGLQKGFDHFMYFICALFSSLMLVESLMMIVASIVPNFLMGIVTGAGIQGVMLLLGGFFKLPNNLPKPVWRYPLHYVAFHTFANQGLFKNEYEGLRFTTDQVGGGSHNYISGEEVLRNTWQADMSYSKWVDLAILLSMIVVYRVLFLVIIKITEKLKPIIVSLSCMLLSPKQTVQIVENPNATPLH* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1985 668 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 11 668 - -
Apr3g1985 668 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 11 668 - -
Apr3g1985 668 SMART AAA_5 57 251 IPR003593 -
Apr3g1985 668 ProSitePatterns ABC transporters family signature. 171 185 IPR017871 GO:0005524
Apr3g1985 668 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 262 IPR027417 -
Apr3g1985 668 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 28 274 IPR003439 GO:0005524
Apr3g1985 668 Pfam ABC-2 type transporter 363 574 IPR013525 GO:0016020|GO:0140359
Apr3g1985 668 Pfam ABC transporter 55 199 IPR003439 GO:0005524
Apr3g1985 668 Gene3D - 39 268 IPR027417 -
Apr3g1985 668 Pfam ABC-2 type transporter 231 287 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1985 Apr-Chr3 35897288 35902770 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1985 47 235 Calmodulin-binding Proteins AT2G36910 27.136 3.95e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1985 K05681 - gmx:100785858 1051.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1985 3 35897288 35902770 Apr3g1985 3 35897288 35902770 ECH