Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1968 ATGGACGGTGGCGGCGGAAACAGAGCCGAAGCGGAGCGGTGGCTCTACACGGCCAACAAACTACTAAGCGCGCGCGACCTGCACGGGGCTCGCTCCTTTGCGATCCGCGCCCGCGAGTCCGACCCGACTTTTGAAGCGTCGGAACTCCTCCTGACGGTGATCGACACACTCCTCGCCGGCGAGTCGCGGATCAACGACCACCACCGCGACTGGTACGGGATCCTCCAAATTCTCCGCTACACGACCAACATCGACCACATCGCCGCCCAGTACCGCCGCCTCGCCCTTCTCCTTGAACCTCACCGGAACCCCTTCGCTTTCGCCAGTCACGCTTTCTCCCTAGTTCACGACGCTTGGTCCATCCTCTCTAACCCTGCCAAAAAGGCCTTGTACGACAGCGACCTCCGATTGCTCACTACGCCGACCCCGGCGCCCCAGCCTCCTCCGCAGCCACAGCAGCATCCTCATCCGCAGTCCCAGTCCACGCCGAGGAGAAACCCTAGATCGCGGGACGGCGCGGCTGAGGACCGGTCTGCTCCCGAGTCCACCGAGTCAACTCGGCAAACTCGAACGGCGAGTGTGGAAACGGAGGGCGACACGAGCTTCTGGACCTCTTGCCCTTACTGTTACGTTCTCTACGAGTATCCGAAGGGGTACGAAGAGTGTACCCTGCGATGCCAGAGCTGCCGTAGGGGTTTCCATGCGGTGGTGATACGGTCGCCACCAGCGTTGACCGGTAAAGATGGATCCTATTGCAGTTGGGGCTTTGTCCCCTTAGGGTTTTCTGAAAATTCAAAAGATGTGAATGGGTTTTCCACCAATTGGAACCCATTTTCACCTTTGTTTCCTTGCCCCTTGAAAGGATCGTCTGATAGGAAACCTCAGAGGAATTGGGATTACTACGATGACGAGGCTGCGGCAGCATTTATTCAGCTTTCTGACCCTAGTGATGATGATTCTGGTGATGGGGATTGGAGGAGTGGTAGTGGGAGGGGGAGGGGGAGGAAGAGGACTAGGACGTATAGGAAGAAAATTTCTGGTGATGTTAGAAGGGAACCTGTGGAGAGACCTAGCAGGGGTGCTCGTGCCGGGCACGAGAATGGAGGTCCTAGTGAGGCTGTTGATGCTGCTGCAAATACTGGCTCTGCTGTTCCATCTGTTCCAAGGGCAGAGTCTAGTAAGAAAGCTGCATTGGGTAGTTCTAGGAGAAGGGGTGCTGGAAACTTGGGGAAGTTGGATTTGAATGTGGAGTTTAGTAATGAGGTGGAAGAGCCTTCTCGCATAGCGCGTGATCGTGAAGGGAATGCCACTGGAAATGCTGAGGATAATATTGAAGGGATTGGGTTTTTTGAGGGTCTTGATGAGTTTCTTAGTAGCTTACCCATTCTCAATGTTGTGGGAGACGATAAGGTTAAGGGTCATTAG 1425 0.5537 MDGGGGNRAEAERWLYTANKLLSARDLHGARSFAIRARESDPTFEASELLLTVIDTLLAGESRINDHHRDWYGILQILRYTTNIDHIAAQYRRLALLLEPHRNPFAFASHAFSLVHDAWSILSNPAKKALYDSDLRLLTTPTPAPQPPPQPQQHPHPQSQSTPRRNPRSRDGAAEDRSAPESTESTRQTRTASVETEGDTSFWTSCPYCYVLYEYPKGYEECTLRCQSCRRGFHAVVIRSPPALTGKDGSYCSWGFVPLGFSENSKDVNGFSTNWNPFSPLFPCPLKGSSDRKPQRNWDYYDDEAAAAFIQLSDPSDDDSGDGDWRSGSGRGRGRKRTRTYRKKISGDVRREPVERPSRGARAGHENGGPSEAVDAAANTGSAVPSVPRAESSKKAALGSSRRRGAGNLGKLDLNVEFSNEVEEPSRIARDREGNATGNAEDNIEGIGFFEGLDEFLSSLPILNVVGDDKVKGH* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1968 474 CDD DnaJ 70 124 IPR001623 -
Apr3g1968 474 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 474 - -
Apr3g1968 474 ProSitePatterns Nt-dnaJ domain signature. 112 131 IPR018253 -
Apr3g1968 474 SMART dnaj_3 69 127 IPR001623 -
Apr3g1968 474 Gene3D DnaJ domain 59 141 IPR036869 -
Apr3g1968 474 SUPERFAMILY Chaperone J-domain 66 135 IPR036869 -
Apr3g1968 474 MobiDBLite consensus disorder prediction 141 156 - -
Apr3g1968 474 MobiDBLite consensus disorder prediction 312 408 - -
Apr3g1968 474 MobiDBLite consensus disorder prediction 345 362 - -
Apr3g1968 474 ProSiteProfiles dnaJ domain profile. 70 135 IPR001623 -
Apr3g1968 474 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 4 474 - -
Apr3g1968 474 MobiDBLite consensus disorder prediction 138 196 - -
Apr3g1968 474 MobiDBLite consensus disorder prediction 168 183 - -
Apr3g1968 474 Pfam DnaJ domain 70 132 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1968 Apr-Chr3 35694256 35696019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1968 10 473 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 41.996 6.33e-105 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1968 - - gmx:100811866 679.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1968 3 35694256 35696019 Apr1g1254 1 21243519 21248249 PCT