Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1936 ATGATCACTGCCACTATGTTGGAGTCTTTAGCTTGTTGCCAAAGCTTTAAGGGATATGACCTCACCAAACAAAAGAGTCCTGGTTACTCTCATGCTATTTCACGATTCTGTAGAAGTTCTATTTTCATGCTATATTCAGTTAACAAGCAAGTATCGCCGTTATCAGACGGTGCTGTTCGTGGGAGATTTCATAGGACTTCTGTTTCAGAACATTTGTTTAAAAGGGGGCCTCTAAATGTTCCATCATTTTCTGGCTGGAAAGGAATCTATTTTTCCAAGTATAGGTCACTACAATGGGAACGGCTACAGACAAATGTAGCATATGATGTTGCCGGTGCTGTTGAAGTCATCAATGATCTAGGATTGGATACTCTTACTTTCTTGGGTGTGACTGTCTTAATTGTGCCCACTTTCAAGTTACTCAGAGCCAGTCCTATACTTGGTTTCTTCTGTGCTGGGGTGGTACTCAATCAGTTTGGTTTAATTAGAAACCTTACTGATGTTAAAGTTTTGTCTGAATGGGGGATCCTTTTCTTGGTTGTACTATCTACCTTAGCATTTACTGCTTTTGAACTTCCACCAAATGGGGCTGTTGGAACAAAAATTTTGGAGTTTCTTTTCCACTCAAGGCCTGATCTGGTGAACATCAGAAGTGTTGATGAAGCTGTAGTGATTGGTGCTGCACTCTCTCTTTCATCCTCAGCATTTGTTCTCCAGCTTCTTGCAGAAAAAGGTGAACTTCCTACAAGATTTGGTTCAGCAACTCTTGGAATACTTCTTTTGCAGGACTTAGCCGTTGTTCCCCTTTTAGTCATACTTCCAATATTAGAGAGTCAGACTATATCTCAGGAGAGTATTTGGCCCATGCTTGCTCAAGAAAGTTTGAAGGCATTAGGTGGATTGGGTTTGCTTTCTCTTGGTGCAAAGTACATTCTCAGAAGAGTTTTTGAGGTTGTTGCAGATACAAGGAGCTCAGAGGCTTTTGTTGCTCTTTGCTTGCTGACTATTGCTGGAACTTCACTAGTCACACAGAATTTGGGCTTCAGTGACACGCTTGGAGCATTTTTAGCTGGAGCAATCTTAGCAGAGACAAATTTCAGGACCCAGATTGAAGCTGACATAAGACCATTTAGAGGCTTGCTGCTTGGTTTGTTTTTTCTTACTACGGGAACTTCAATTGACATGCAGCTCCTTCTGCGAGAGTGGCCAAATGTACTTTCACTCTTGGGAGGTTTAATTGCCATCAAGACATTGATCATAACTGCAATTGGTCCTCGTGTTGGGCTTACCTTACAAGAAAGTGTAAGAATAGGATTGCTTCTATCCCAAGGAGGCGAGTTTGGATTTGTTGTTTTCTCTTTAGCAAATAGGCTTGGGGTGCTTCCACTTGAGCTTAACAAGCTGCTCATAATTGTTGTTGTATTGTCAATGGCATTAACCCCATTTCTGAATGAAGCTGGAAGAAGGGCTGCTAATTTTATTGAAGACAAATTTGATGCTGAAAATAAACAAAAAATTTCTGAGACGGTTAACTATGATGCTAGTGAACCTGTTGTTATCCTTGGATTTGGACAAATGGGCCAGGTCCTTGCAAATTTCCTGTCCAATCCATTGGCTACAGGAGGAGATAGTGATGCAGTAGGATGGCCTTATGTGGCATTTGATCTTGACCCCACAGTAGTAAAGACTGCTAGAGAACTTGGTTTTCCCATTCTCTATGGGGATGGATCGCGTCCTGATGTTCTTCATTCTGCTGGTATTCATTCCCCTAAAGCTATTATGATTATGTACACTGGGAAGAAGAAGACAATTGAAGCTGTTCAGAGGCTAAGATTGATTTTTCCTGCAGTGAAAGTTGCTGACATGAAGGAGACACGTGTACCAGTGGCAACAACTACACCAGAATCTGAATTGTTGGAACTGAACCAGAAAGATCAAGCTTCTTTGGTTACAATTCAGAAGGAAGTAAATCCTGAAGAGCAAGATCATGAACTAAATCAAGCTGTGAATTTAGAAGGAAATGGTGTTTTACTTAGCAAACAAGGTACTGAAGAAAGCTCAATAGTTGGATCACAAGATTTAAGACCGAAGAGTCAAGTAGACCCTTCAATCACTTCACACACTGCCACAGAGGAACCCTAA 2142 0.4118 MITATMLESLACCQSFKGYDLTKQKSPGYSHAISRFCRSSIFMLYSVNKQVSPLSDGAVRGRFHRTSVSEHLFKRGPLNVPSFSGWKGIYFSKYRSLQWERLQTNVAYDVAGAVEVINDLGLDTLTFLGVTVLIVPTFKLLRASPILGFFCAGVVLNQFGLIRNLTDVKVLSEWGILFLVVLSTLAFTAFELPPNGAVGTKILEFLFHSRPDLVNIRSVDEAVVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDLAVVPLLVILPILESQTISQESIWPMLAQESLKALGGLGLLSLGAKYILRRVFEVVADTRSSEAFVALCLLTIAGTSLVTQNLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFLTTGTSIDMQLLLREWPNVLSLLGGLIAIKTLIITAIGPRVGLTLQESVRIGLLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIVVVLSMALTPFLNEAGRRAANFIEDKFDAENKQKISETVNYDASEPVVILGFGQMGQVLANFLSNPLATGGDSDAVGWPYVAFDLDPTVVKTARELGFPILYGDGSRPDVLHSAGIHSPKAIMIMYTGKKKTIEAVQRLRLIFPAVKVADMKETRVPVATTTPESELLELNQKDQASLVTIQKEVNPEEQDHELNQAVNLEGNGVLLSKQGTEESSIVGSQDLRPKSQVDPSITSHTATEEP* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1936 713 Gene3D - 119 491 IPR038770 -
Apr3g1936 713 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 65 180 - -
Apr3g1936 713 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 180 626 - -
Apr3g1936 713 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 65 180 - -
Apr3g1936 713 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 180 626 - -
Apr3g1936 713 Pfam TrkA-N domain 518 619 IPR003148 GO:0006813
Apr3g1936 713 Pfam Sodium/hydrogen exchanger family 126 484 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Apr3g1936 713 ProSiteProfiles RCK N-terminal domain profile. 517 619 IPR003148 GO:0006813
Apr3g1936 713 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 518 619 IPR036291 -
Apr3g1936 713 Gene3D - 517 631 - -
Apr3g1936 713 MobiDBLite consensus disorder prediction 676 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1936 Apr-Chr3 35378534 35388602 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1936 1 616 Inorganic Solute Cotransporters AT4G04850 70.078 0.0 839
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1936 - - aprc:113858933 1130.16