Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1917 ATGAGCAACGCTGGTAGCATTGAACTCTATGGAGGAACACAAGAAACTGCTGATAACAGTTTATTTGATCGATCATTTTGGTACACTTTTGCCTTTGGTTATGTGTTTTCAGCAACATGGGTCACAATTGCTCTTATGTATTTCTGTGTGCCTTGGGCACAACAGAAGAAGAGCAACGCAAGTTTCACATCTTCCAACGCGGGTAGGAGTAAGAAGATCCATGACGCCAATCAAGTGCCCAACCTGCTCCCTTTGTCGTTGCTCAGGAAAGGAAACCCTGTGTTGGTTTCTAGAGCACTGGACAAGTTAATATCTAGTGTGAGCTTCACCGAACTGTGTGAGGCAACTGATTACTTCAACATGATCAATGTTATTGGGATGGGAAAGACAGGGATGATGTATAAGGCCAAGCTTGTTAATGCCCCCCTAGTGGCAGTGAAGAGACTATACGATTCTCAACTATTTGAAACAAAGTTTGCTAAAGAAATCATGATTCTTGGGAGATTCAAACATAGAAACATAGTAGGTCTTCTTGGGTTTTGCACAGAAAGAAAGCAAAGGATCCTAGTGTATGAGTTCATGACAAATGGTAAACTATCTGATTGCTTGTATCCTTTGCAAAATGAAGCCTTTCCATTGGAATGGCCAATAAGGCTTAAAATAGCACTTGGGTTGTCAAGGGTTTTATCTGGTCTCCACCATAGCTGCAATTGGCAGATACTCCATCAAGGTATAAGCTCAGAGCATGTTTTGCTGGATCAGAATTTTGAGCCCAAATTATCGAATTTTACAAATGCTAAATTCATCAAAGGAAACAATAATAAGCTAGCAAAGAAGGACGTCTATGATTTCGGAATTGTTCTTTTGCAACTGATCACGGGAAACAAGTGTATTCAAATGAATGGATTTTGTAACGTCATTGATGAATCTCTATTAGGAAAAGGATTCGACGAAGAAATCTCTTGTCTAGTCAAGATTGCAATTGACTGCATACAGATGTCTCCACAGATGAGGCCAACTATGCTTGATGTGTATAAAAATATAAAAAGGTTATGGGAAGGATATGGAAGTGATGATTGA 1080 0.3963 MSNAGSIELYGGTQETADNSLFDRSFWYTFAFGYVFSATWVTIALMYFCVPWAQQKKSNASFTSSNAGRSKKIHDANQVPNLLPLSLLRKGNPVLVSRALDKLISSVSFTELCEATDYFNMINVIGMGKTGMMYKAKLVNAPLVAVKRLYDSQLFETKFAKEIMILGRFKHRNIVGLLGFCTERKQRILVYEFMTNGKLSDCLYPLQNEAFPLEWPIRLKIALGLSRVLSGLHHSCNWQILHQGISSEHVLLDQNFEPKLSNFTNAKFIKGNNNKLAKKDVYDFGIVLLQLITGNKCIQMNGFCNVIDESLLGKGFDEEISCLVKIAIDCIQMSPQMRPTMLDVYKNIKRLWEGYGSDD* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1917 359 Gene3D Transferase(Phosphotransferase) domain 1 278 356 - -
Apr3g1917 359 Gene3D Transferase(Phosphotransferase) domain 1 194 277 - -
Apr3g1917 359 PANTHER RECEPTOR-LIKE PROTEIN 55 15 297 - -
Apr3g1917 359 PANTHER RECEPTOR-LIKE PROTEIN 55 302 353 - -
Apr3g1917 359 ProSiteProfiles Protein kinase domain profile. 119 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1917 359 Gene3D Phosphorylase Kinase; domain 1 89 193 - -
Apr3g1917 359 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 302 353 - -
Apr3g1917 359 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 15 297 - -
Apr3g1917 359 SUPERFAMILY Protein kinase-like (PK-like) 100 346 IPR011009 -
Apr3g1917 359 Pfam Protein kinase domain 120 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1917 Apr-Chr3 35216090 35217770 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1917 85 356 Receptor kinase-like Gene Family AT1G69990 32.278 1.93e-46 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Apr3g1917 Pkinase 8.9e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1917 - - vra:106766350 491.886