Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1895 ATGAAAATATTTTCCGCTACAGAGCTTCTGATCTGTCCGTTTTTTCTGCTGTTGCTACTTTACCTTTCTTGTCAGTGCTTATCACTTGATAGCATAACCATAAACCAACCCATGAAAGACGGCGACCGTTTAGTCTCCATAGACCGAGGAAACTTTGCACTCGGTTTCTTTAGCCCAAGAAACTCTACAGAGCGTTACATCGGGATATGGTACAACAAAATCTCGGAACAAACGGTCGTGTGGGTTGCCAACAGAGACACTCCTCTGAACGACACTTCCGGTGTTCTCTCCATCAACAACCTCGGAAACATCGTACTCCACCACCACCACAACAACCCAGACCTTAACCCCGTTTGGTCTTCCAACGCTTCCACCTCATCTGGCAACGTTTCAGCCAAGCTTCTGGACACGGGAAACTTTGTTTTGATCCAAACTGACAATAATAAAGTTCTGTGGCAGAGTTTTGATTATCCAAGCAACACTTTGCTTCCGTTCATGAAACTCGGGTTGGACCTCAAAACCGGTGTGAACTGGTTCCTAAGATCTTGGAAATCCCCGAACGACCCAGGAACCGGAAACTTAACTTACAGGATCGACCCGACTGGGTTTCCCCAGCTCTTTCTATTCAAGGACAATACTCCGTTATGGAGGGTGGGGTCGTGGACGGGTCAGAGATGGAGCGGGGTACCCGAGATGACTCCGAACTTCATTTTCAGCGTTAGCTACGTCGACAATGAAAGTGAAGTTTCCATATTGTACGGAGTGAAGGATCCCACGGTATTCTCGAGAATGGTGCTTGAAGAGACAGGTCACGTGACAAGGTTCACGTGGCAAGCTCACGAGCACAGGTGGTTTCCAATCTGGGATGCTCCGAAGGAGGAGTGCGACAACTTCAGGCGGTGCGGGTCGAACGCGAACTGTGATCCGTATAACGCAGATAAGTTCGTATGCGAGTGTTTACCCGGATTCGAACCCAAGTTTGAGAGAGAATGGTATCTTAGAGACGGGTCGGGTGGGTGTGTGAGGAAGCGCAACGTGTCCACGTGTCGAAGTGGTGAGGGGTTTGTGGAAGTGCCACGTGTGAAGGTTCCAGATACTTCCAAGGCGCGTGTGGATGCAACGATGAGTATGAGAGAGTGCAGGGAGAGCTGCCTCAAGGATTGTTCTTGTGCAGCGTACACGAGTGCCAACGAGAGCTCCGATAGTGGGTGTGTTACTTGGCACGGTGACATGGAGGATACAAGGACTTACACACAAGTCGGACAAAGTTTGTTCGTACGAGTGGATGCACTTGAATTGGCTAAATATTCAAAACATCCGTATGGTTCCCTTGGCAAGAAGGGGATGGTAGCAATTTTAACCATTGCTATTTTCTTGTTATTGTTTTTGGGGATCACTTTCTTGTATTGGTTTGTAAAAGGCAGGAAAAATGGGATAAGAAGGGATCGAAAGTATTCCTTTCGTCTTAGGATTGATGACTCTCCCAGTCTTCAAGAATTTAACAGTACGCAAAATTCAGATTTACCATTCTTTGATCTTAGCTCCATAGCTGCTGCAACAGACAATTTCTCTACAGATAACAAGCTTGGTCAAGGTGGTTTCGGTTCTGTTTATAAGGGTACACTGAGTAATGGAATGGCAATAGCAGTGAAGAGACTGTCAAAGTATTCTGGACAAGGCATAGAAGAGTTTAAAAATGAGGTTGTTTTGATTTCAAAGCTCCAGCACAGAAATCTTGTGAGGATCTTAGGCTGTTGCATTGAAGGGGAGGAGAAGATGTTAATCTACGAGTATTTGCCTAACAAAAGCTTGGACTCTTTCATTTTTGATGAATATAAAAGGTCACAGCTAGACTGGAGAAAACGTTTTGATATCATCTGTGGGGTTGCTAGAGGGATCTTATACCTTCATCAAGATTCACGATTAAGAATCATTCATAGAGACCTAAAGGCCAGTAATGTCTTGCTGGACTCTTCACTGAACCCAAAAATTGCAGATTTTGGCATGGCTAGAATATTTGGTGGAGACCAAATTGAAGCAAACACAAATCGTGTAGTTGGAACCTATGGCTATATGTCACCAGAATATGCCATGGAAGGACAATTTTCAGTAAAATCTGATGTATACAGCTTTGGAATTTTACTTCTAGAGATTGTTACCGGCAGAAAGAATAGTGGTCACTACGAAGACATTACATCCACAAACTTAGTTGGACATATATGGAATCTATGGAAAGAAGGCAAAGCCATGGAGATTGTTGATCCATCATTAGGAGAGTCATGCTCTGACCGTGAAGTCCAAAGATGCATTCAAATTGGGCTTTTGTGTGTGCAAGATTATGCTGTAGATAGGCCATTTATGTCAACAGTTATTTTCATGTTGGGTAATGACTCAACTCTTCCTACTCCAAAACAACCAGCATTTATTTTCAAGAAAACTAATTATGAGAGTTCAAATCCATCAACAAGTGATGGACATTATTCAGTAAATGAGGTAAGTATGACTATGGTTGAAGCTCGCTGA 2523 0.4396 MKIFSATELLICPFFLLLLLYLSCQCLSLDSITINQPMKDGDRLVSIDRGNFALGFFSPRNSTERYIGIWYNKISEQTVVWVANRDTPLNDTSGVLSINNLGNIVLHHHHNNPDLNPVWSSNASTSSGNVSAKLLDTGNFVLIQTDNNKVLWQSFDYPSNTLLPFMKLGLDLKTGVNWFLRSWKSPNDPGTGNLTYRIDPTGFPQLFLFKDNTPLWRVGSWTGQRWSGVPEMTPNFIFSVSYVDNESEVSILYGVKDPTVFSRMVLEETGHVTRFTWQAHEHRWFPIWDAPKEECDNFRRCGSNANCDPYNADKFVCECLPGFEPKFEREWYLRDGSGGCVRKRNVSTCRSGEGFVEVPRVKVPDTSKARVDATMSMRECRESCLKDCSCAAYTSANESSDSGCVTWHGDMEDTRTYTQVGQSLFVRVDALELAKYSKHPYGSLGKKGMVAILTIAIFLLLFLGITFLYWFVKGRKNGIRRDRKYSFRLRIDDSPSLQEFNSTQNSDLPFFDLSSIAAATDNFSTDNKLGQGGFGSVYKGTLSNGMAIAVKRLSKYSGQGIEEFKNEVVLISKLQHRNLVRILGCCIEGEEKMLIYEYLPNKSLDSFIFDEYKRSQLDWRKRFDIICGVARGILYLHQDSRLRIIHRDLKASNVLLDSSLNPKIADFGMARIFGGDQIEANTNRVVGTYGYMSPEYAMEGQFSVKSDVYSFGILLLEIVTGRKNSGHYEDITSTNLVGHIWNLWKEGKAMEIVDPSLGESCSDREVQRCIQIGLLCVQDYAVDRPFMSTVIFMLGNDSTLPTPKQPAFIFKKTNYESSNPSTSDGHYSVNEVSMTMVEAR* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1895 840 SMART ntp_6 350 428 IPR003609 -
Apr3g1895 840 Pfam S-locus glycoprotein domain 216 327 IPR000858 GO:0048544
Apr3g1895 840 ProSiteProfiles EGF-like domain profile. 291 329 IPR000742 -
Apr3g1895 840 CDD PAN_AP_plant 347 428 - -
Apr3g1895 840 CDD B_lectin 35 158 IPR001480 -
Apr3g1895 840 Gene3D Phosphorylase Kinase; domain 1 486 598 - -
Apr3g1895 840 ProSiteProfiles Protein kinase domain profile. 523 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1895 840 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 59 836 - -
Apr3g1895 840 CDD STKc_IRAK 529 794 - -
Apr3g1895 840 ProSiteProfiles PAN/Apple domain profile. 349 429 IPR003609 -
Apr3g1895 840 SMART serkin_6 523 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1895 840 Gene3D - 27 155 IPR036426 -
Apr3g1895 840 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 189 IPR036426 -
Apr3g1895 840 Gene3D Transferase(Phosphotransferase) domain 1 599 803 - -
Apr3g1895 840 Pfam Protein tyrosine and serine/threonine kinase 525 740 IPR001245 GO:0004672|GO:0006468
Apr3g1895 840 Pfam D-mannose binding lectin 78 184 IPR001480 -
Apr3g1895 840 SUPERFAMILY Protein kinase-like (PK-like) 506 820 IPR011009 -
Apr3g1895 840 ProSiteProfiles Bulb-type lectin domain profile. 29 155 IPR001480 -
Apr3g1895 840 Pfam Domain of unknown function (DUF3403) 796 840 IPR021820 GO:0004674
Apr3g1895 840 ProSitePatterns Protein kinases ATP-binding region signature. 529 551 IPR017441 GO:0005524
Apr3g1895 840 SMART blect_4 35 158 IPR001480 -
Apr3g1895 840 Pfam PAN-like domain 349 413 IPR003609 -
Apr3g1895 840 PIRSF SRK 2 840 IPR024171 GO:0004674
Apr3g1895 840 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKS1 59 836 - -
Apr3g1895 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1895 Apr-Chr3 34950808 34955502 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1895 494 840 Receptor kinase-like Gene Family AT4G23150 57.790 1.04e-133 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr3g1895 PK_Tyr_Ser-Thr 5.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1895 - - gmx:100812814 1420.22