Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1894 ATGCACCAAGCTAAAACCCTTCCCTGCTTTGTCATGCACCAAAATCATATACATAGCATTTGGTTGCTTAATGCATTGATTCTATTCCTCATCTTCTCATTTTGCACATGTTCTGACACCATATCTACTGGCAAAGCCTTAAGAGATGGGGAGCTTCTTGTTTCTGAAGATAAAACATTTGCTCTTGGATTCTTCAGTTCAGGAAAGTCCACATCCCGCTATGTGGGAATATGGTACAATAATTTGCCAGAAAAAACTATTGTTTGGGTTGCAAACAGAGATAATCCCATCAATGACACTTCTGGGGTGCTCTCCATCAACCCTGATGGAAACCTAGTCCTCCACCACAACTATAGCACTGTTCCCATTTGGTCTACCAATGTTTCACTCCCCCAACCAAACAGCACCAATGTTATAGCTCAACTTTCAGACATAGCAAACCTTGTTCTGATTGTGAACAACAACAATACTGTCATATGGCAAAGCTTTGATCATCCCACAGACACATTGCTTCCATATCTAAGACTTGGTTTTGACAGAAGAACCAACCAGAGTTGGTTCCTCCAATCTTGGATAACAGATGATGACCCAGGAATAGGTTCTTACACATTGAAATTCAGCACTAGTGGGAAACCACAATTGTTCTTGTACAATCAGAACCTTCCCTGGTGGCGAGGTGGATCATGGAATGGTGAACTATTGATGGGTATACCCAACATGAAACGAGATATGTTAACTTTTAACGTTTCTTTCGTGGAAGATGAAAACCAAGTAGCACTCTCATATAACATGTTTGATAGGTCCATGATCACTAGGATAGTAGTTCAGCAATCAGGTTTCTTTCAAACATTCACTTGGGATAACCAAAAGGGTCAATGGAATAGGTACTGGTCTGAACCAACAAATCAATGTGATAACTATGGAACCTGTGGATCAAATAGTAACTGTGACCCTTTGAACTTTGAGGACTTTCGATGTGCTTGTCTTCCTGGGTTTGAACCCAAATTCCCACATGATTGGTATGAGAATAGAGATGAGTCAGGAGGGTGTGTGAGGAAGCGAGGTGTATCCATTTGTGGGAATGGAGAAGGGTTTGTGAAAGTTGAGGGTGTGAAGATTCCTGATACCTCAGTGGCAAATGCCAAAGGGGGTTTGAGTTTGGAAGAATGTGAGAATGAATGCTTCAGAAACTGTTCTTGCACTGCCTATGCAGTTGCTGATGTGAGGAATGGTGGAAGTGGGTGCTTGGCATGGCATGGGAATTTAGTAGACGTGCAAAAACTAAGTGATCAAGGCCAAGATTTATTTGTGCGTGTTGATGCAGTTGAATTAGCCAATTACTACAAAAAGACAAAAGTACTTGGTAAAAAGAGGATGGTTGGAATTCTGGTAGCTTCTTCTGTACTTGCCGGTGTCATTCTCTTCTCCTGTGTGTATTACCTATGGAAGAGAAAAGGCAAAGGTGAAATGATGCAACATTTAAACCAAGAATCTGCACGAGAAGGGAACGATGTTCAAAGCAACTCACATCCAAATCTTCCCTTTTTTAGCTTTAAATTGATAATGGCATCCACAAGAAATTTTTCTGATGAGAATAAGCTTGGACAAGGAGGATTTGGCTCTGTCTATAAGGGTTGCCTAGTCAATGGACAAGAGATAGCGGTGAAAAGATTGTCCAAACATTCAGGGCAAGGGACAAAAGAGTTTAAAAATGAAGTTACACTGCTAGTTAAACTCCAACACAGAAATCTGGTGAAGTTGCTCGGTTGTTGCTTTGAAAAAGAAGAAAGGATGCTAGTTTATGAATACCTACCAAATAAAAGCTTGGACTTCTTTATATTTGATAAAAATCAAAGGTCATTACTGGTTTGGAATAAGCGCTTTGAAATCATTTTGGGGATTGCTCGTGGTGTTCTATATCTTCATCAAGACTCAAGGCTAAAAATAATCCACAGAGATCTAAAACCCAGTAACGTTCTGCTTGATGCTGCAATGAATCCTAAAATCTCAGATTTTGGTATGGCTAGAATATTTGGAGAAGATCAAATCCAAGCAAGGACGAAAAGAGTGGTTGGAACATATTTTGGTGTCTTATTATTGGAGATTATCGCTGGCAAGAGGAACACAGATTGTGAAATAGGAAGATCCTCTCCAAATTTAATTGGATATGTGTGGACACTTTGGACAGAGGGAAAGGCCTTGGATATGGTTGATACAACATTGGATCAGTCTTATCCCCCTAATCTTGTTTTGAGGTGCATTCAAATTGGACTCTTGTGTGTGCAAGAAAATGCCACTAATAGACCCTCCATGTTAGATGTTGTTTTCATGTTAAGTAATGAAACACCTCTTTGCCTACCCCAAAAACCAGCATTTTTATTCAATGGGAACCAAGGTTTGAAAGAGTCATCAACATCGGGAGGAGGATCCTCAATAAATGAACATGCAACAGGGGCATCAAAGAGTAACTCTATGCAATCACCTGAGAATCTTCCCTGCGTTCACATGCGCCAAAATCATAAACACAACATTAGGGACCTTTATTCTTTGATTATACTTCTCAGCTTCTCATTTTGCTCTTGTTCTGATACCATATCTACCGATAAAGCCATCAAAGATGGTGAGCTCCTTATTTCTAAAGCTAACAAATTTGCTCTTGGATTCTTCAGTCCAAGCAAGTCCACATCCCGCTATGTGGGAATATGGTACAACAATTTGCCAATCCAAACTGTTGTTTGGGTTGCAAACAGAGACAATCCTATCAATGACACTTCTGGGGTTCTCTCAATCAACCCACATGGAAATCTAGTCCTTCACCATAACCACAGTACCATTCCCATTTGGTCTACCAATGTTTCACTCCCCCAATCAAACAACACCAACGTTATAGCTCAACTCTTAGACACAGCAAACCTTGTTCTAATTCTAAACGACACCAAAACTGTCATATGGCAAGGCTTTGATCATCCCACAGACACCTTTCTTCCAACTCTAAGACTTGGTTTTGACAAAAGAACCAACCAGAGTTGGTCCATCCAATCTTGGAAAACAGATGATGACCCAGGATCAGGTGCTTACACTTTGAAATTCAGCAACATTGGGAAACCACAGTTGTTCCTGTACCAGCAGAACACTCCCTTGTGGCGAGGTGGATCGTGGAACGGTGAATACTTTTCGGGTGTACCCAACATGATACGAGATTTGTCGAGTTTGAACTTCTCTTTTGTAGAAGATGACAACCAAGTAGTACTCTCATTTGACCCTATTGACAAGTCCCTCATCATTAGGCCATTAGTTCAGCAACCAGGTTTCTTTCAAGCCTTCACTTGGGATAACCAAAATGATCAATGGAGCAGGTACTGGTCTGAGCCAGCAAATCAATGTGATAACTACGGAACCTGTGGATCAAACAGTAACTGTAACCCTTTAAACTTCGATGACTTTCGGTGTACTTGTCTTCCCGGGTATGAACCCAAGTTCCCAAATGATTGGTACCAAAATAAAGATACCTCAGGAGGTTGTGTGAGGAATGAAGGTGCATCCGTTTGTAGGAATGGAGAAGGGTTTGTCAAAGTTGAAAGCTTGAAGCTTCCTGATACCTCTGTGGCCATTGTCCAAGCGAATTTGAGTTTGGATGAGTGCGAGAATGAATGCTTGAGAAACTGTTCTTGCACTGCTTATGCTGTTGCTGATGTGAGAAATGGTGGAAGTGGGTGCTTGGCTTGGCATGGGAATTTAACTGACTCGCAAATACTTAGTGGTCAAGGCCAAGATTTATTTGTGCGTGTTGACGCGGCTGAACTGGCAATTTACTACAATAAAACAGAAAGAACACACGGTAAAAGGAAGATGCTTGCAATTGTGGTAGCTTCTGTATCTGCTGCAGGTGTCATTCTCCTCCTCTGTTGCGTGTACTACCTGTGGAAAAGAAAAGGCAAAGGAGTTTGTGGCATTGTTACAGACAGGGGTGACTGTGAAGACAGTCTCTCCGATAAAATGATGCAGCATTTTAACCAAGACTCCCTTACAGAGGAGAACGATGTTCAAAGCAATACACATCCAAATCTTCCCTTTTTTAGCTTTAAAGTCATAATGACTGCCACAAGAAATTTTAGTGATGAGAATAAGCTTGGGCAAGGTGGTTTTGGTTCTGTCTATAAGGGCAGCCTAGTGGATGGACAAGAAATAGCAGTCAAAAGGTTGTCTGAACATTCAGGTCAAGGAACAGAAGAGTTTAAAAATGAAGTTAGACTACTAGTTAAACTCCAACACAGAAATCTCGTGAGGTTACTCGGTTGTTGCTTTGAAAAGGAAGAAAGGATGCTGGTTTATGAGTTCCTACAAAAGAAGAGCTTGGACTTCTTTATATTTGATGAAAATCAAAGGTCATCATTGGCTTGGGGTAAGCGCTTTGAAATCATTTTGGGCATTGCTCGAGGTATTTTATATCTTCATCAAGATTCAAGACTAAAAATAATTCATAGAGATCTAAAAGCCAGTAATGTTCTTCTTGATGCCGCAATGAATCCCAAAATCTCAGATTTTGGAATGGCTAGAATATTTGGAGAAGATCAAATACAAGCTAGAACGAATAGAGTTGTTGGAACATATGGTTATATGGCACCTGAATATGCAATGGAAGGACGGTACTCAACAAAATCTGATGTGTTCAGTTTTGGAGTTTTACTATTAGAGATTATTGTTGGGAAGAAAAATACAAATTATGAAATTGGAAGAGCCTCCCCAAATTTAATTGGACATGTGTGGATACTTTGGACAGAAAGCAGGGCCTTGGATATAGTTGATTTTACATTGGACCCTTATCCTCCTGATCTGGTTCTAAGGTGCGTTCATATTGGACTCTTGTGTGTGCAAGAAAATGTCATTGATAGACCATCCATGTCGGAAGTTGTTTTCATGCTAGGCAATGAAATACCTCTTCCCCCACCCCAAAAGCCAGCATTTTTATTCAATGGGAACCAAAATTTGCCAGAGTCATCGATATCTGCAGGAGGATCTTCAATGAATGAAGTAACAGAAACAACCATCAGTGCTCGCTAA 5061 0.4058 MHQAKTLPCFVMHQNHIHSIWLLNALILFLIFSFCTCSDTISTGKALRDGELLVSEDKTFALGFFSSGKSTSRYVGIWYNNLPEKTIVWVANRDNPINDTSGVLSINPDGNLVLHHNYSTVPIWSTNVSLPQPNSTNVIAQLSDIANLVLIVNNNNTVIWQSFDHPTDTLLPYLRLGFDRRTNQSWFLQSWITDDDPGIGSYTLKFSTSGKPQLFLYNQNLPWWRGGSWNGELLMGIPNMKRDMLTFNVSFVEDENQVALSYNMFDRSMITRIVVQQSGFFQTFTWDNQKGQWNRYWSEPTNQCDNYGTCGSNSNCDPLNFEDFRCACLPGFEPKFPHDWYENRDESGGCVRKRGVSICGNGEGFVKVEGVKIPDTSVANAKGGLSLEECENECFRNCSCTAYAVADVRNGGSGCLAWHGNLVDVQKLSDQGQDLFVRVDAVELANYYKKTKVLGKKRMVGILVASSVLAGVILFSCVYYLWKRKGKGEMMQHLNQESAREGNDVQSNSHPNLPFFSFKLIMASTRNFSDENKLGQGGFGSVYKGCLVNGQEIAVKRLSKHSGQGTKEFKNEVTLLVKLQHRNLVKLLGCCFEKEERMLVYEYLPNKSLDFFIFDKNQRSLLVWNKRFEIILGIARGVLYLHQDSRLKIIHRDLKPSNVLLDAAMNPKISDFGMARIFGEDQIQARTKRVVGTYFGVLLLEIIAGKRNTDCEIGRSSPNLIGYVWTLWTEGKALDMVDTTLDQSYPPNLVLRCIQIGLLCVQENATNRPSMLDVVFMLSNETPLCLPQKPAFLFNGNQGLKESSTSGGGSSINEHATGASKSNSMQSPENLPCVHMRQNHKHNIRDLYSLIILLSFSFCSCSDTISTDKAIKDGELLISKANKFALGFFSPSKSTSRYVGIWYNNLPIQTVVWVANRDNPINDTSGVLSINPHGNLVLHHNHSTIPIWSTNVSLPQSNNTNVIAQLLDTANLVLILNDTKTVIWQGFDHPTDTFLPTLRLGFDKRTNQSWSIQSWKTDDDPGSGAYTLKFSNIGKPQLFLYQQNTPLWRGGSWNGEYFSGVPNMIRDLSSLNFSFVEDDNQVVLSFDPIDKSLIIRPLVQQPGFFQAFTWDNQNDQWSRYWSEPANQCDNYGTCGSNSNCNPLNFDDFRCTCLPGYEPKFPNDWYQNKDTSGGCVRNEGASVCRNGEGFVKVESLKLPDTSVAIVQANLSLDECENECLRNCSCTAYAVADVRNGGSGCLAWHGNLTDSQILSGQGQDLFVRVDAAELAIYYNKTERTHGKRKMLAIVVASVSAAGVILLLCCVYYLWKRKGKGVCGIVTDRGDCEDSLSDKMMQHFNQDSLTEENDVQSNTHPNLPFFSFKVIMTATRNFSDENKLGQGGFGSVYKGSLVDGQEIAVKRLSEHSGQGTEEFKNEVRLLVKLQHRNLVRLLGCCFEKEERMLVYEFLQKKSLDFFIFDENQRSSLAWGKRFEIILGIARGILYLHQDSRLKIIHRDLKASNVLLDAAMNPKISDFGMARIFGEDQIQARTNRVVGTYGYMAPEYAMEGRYSTKSDVFSFGVLLLEIIVGKKNTNYEIGRASPNLIGHVWILWTESRALDIVDFTLDPYPPDLVLRCVHIGLLCVQENVIDRPSMSEVVFMLGNEIPLPPPQKPAFLFNGNQNLPESSISAGGSSMNEVTETTISAR* 1687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1894 1686 Gene3D Transferase(Phosphotransferase) domain 1 1447 1645 - -
Apr3g1894 1686 Gene3D Transferase(Phosphotransferase) domain 1 604 694 - -
Apr3g1894 1686 ProSiteProfiles EGF-like domain profile. 300 338 IPR000742 -
Apr3g1894 1686 CDD B_lectin 47 166 IPR001480 -
Apr3g1894 1686 SMART ntp_6 360 439 IPR003609 -
Apr3g1894 1686 SMART ntp_6 1184 1263 IPR003609 -
Apr3g1894 1686 Gene3D Phosphorylase Kinase; domain 1 1345 1446 - -
Apr3g1894 1686 SUPERFAMILY alpha-D-mannose-specific plant lectins 911 1021 IPR036426 -
Apr3g1894 1686 ProSiteProfiles Protein kinase domain profile. 1371 1655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1894 1686 Pfam Protein tyrosine and serine/threonine kinase 1374 1637 IPR001245 GO:0004672|GO:0006468
Apr3g1894 1686 ProSiteProfiles PAN/Apple domain profile. 1183 1264 IPR003609 -
Apr3g1894 1686 SUPERFAMILY Protein kinase-like (PK-like) 1352 1659 IPR011009 -
Apr3g1894 1686 ProSitePatterns Protein kinases ATP-binding region signature. 534 556 IPR017441 GO:0005524
Apr3g1894 1686 CDD PAN_AP_plant 360 439 - -
Apr3g1894 1686 Pfam D-mannose binding lectin 910 1016 IPR001480 -
Apr3g1894 1686 Pfam D-mannose binding lectin 86 191 IPR001480 -
Apr3g1894 1686 MobiDBLite consensus disorder prediction 1666 1686 - -
Apr3g1894 1686 SMART blect_4 44 166 IPR001480 -
Apr3g1894 1686 SMART blect_4 868 990 IPR001480 -
Apr3g1894 1686 ProSiteProfiles Bulb-type lectin domain profile. 862 987 IPR001480 -
Apr3g1894 1686 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 231 IPR036426 -
Apr3g1894 1686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1492 1504 IPR008271 GO:0004672|GO:0006468
Apr3g1894 1686 CDD PAN_AP_plant 1184 1263 - -
Apr3g1894 1686 Gene3D Hepatocyte Growth Factor 1181 1260 - -
Apr3g1894 1686 Gene3D Hepatocyte Growth Factor 357 437 - -
Apr3g1894 1686 ProSiteProfiles PAN/Apple domain profile. 359 440 IPR003609 -
Apr3g1894 1686 MobiDBLite consensus disorder prediction 803 828 - -
Apr3g1894 1686 ProSitePatterns Protein kinases ATP-binding region signature. 1377 1399 IPR017441 GO:0005524
Apr3g1894 1686 Gene3D - 34 164 IPR036426 -
Apr3g1894 1686 Gene3D - 858 987 IPR036426 -
Apr3g1894 1686 ProSiteProfiles Protein kinase domain profile. 528 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1894 1686 CDD STKc_IRAK 1377 1641 - -
Apr3g1894 1686 ProSiteProfiles Bulb-type lectin domain profile. 38 163 IPR001480 -
Apr3g1894 1686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 649 661 IPR008271 GO:0004672|GO:0006468
Apr3g1894 1686 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 21 813 - -
Apr3g1894 1686 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 845 1683 - -
Apr3g1894 1686 SUPERFAMILY Protein kinase-like (PK-like) 509 788 IPR011009 -
Apr3g1894 1686 Pfam S-locus glycoprotein domain 1048 1160 IPR000858 GO:0048544
Apr3g1894 1686 Pfam S-locus glycoprotein domain 224 336 IPR000858 GO:0048544
Apr3g1894 1686 Pfam Protein kinase domain 529 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1894 1686 Gene3D Transferase(Phosphotransferase) domain 1 695 788 - -
Apr3g1894 1686 ProSiteProfiles EGF-like domain profile. 1124 1162 IPR000742 -
Apr3g1894 1686 Gene3D Phosphorylase Kinase; domain 1 488 603 - -
Apr3g1894 1686 Pfam PAN-like domain 359 425 IPR003609 -
Apr3g1894 1686 Pfam PAN-like domain 1183 1248 IPR003609 -
Apr3g1894 1686 PANTHER - 21 813 - -
Apr3g1894 1686 PANTHER - 845 1683 - -
Apr3g1894 1686 CDD B_lectin 871 990 IPR001480 -
Apr3g1894 1686 SMART serkin_6 1371 1640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1894 1686 SMART serkin_6 528 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1894 Apr-Chr3 34931875 34948275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1894 460 798 Receptor kinase-like Gene Family AT4G23190 47.956 7.47e-99 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr3g1894 PK_Tyr_Ser-Thr 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1894 - - aprc:113859914 3445.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1894 3 34931875 34948275 Apr1g1328 1 22206121 22209411 PCT