Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1888 ATGGAGTTTGATCTTGAAGATCCCATATCATGCTTCAAAGAAAATCAAACTTGTAGTATATCAGAACTCTTTGCCTCAGAATCTGATTACATGCCATCACCAAACCACTTAAGCTCAGCAGATTTTCACGTTTCATTTCGTTGTGAGGTTAGTGTTATTCAGGTCCATTTTTCCTGCAATTTGGACCCATTTGTATCTTACCTTGCCATAAATTACTTGGATCGCTTCATGTCAAGGCAAGAAATACCGAGGTTGCAGCAGGAAAATTCATGGTTCCTTAGGGTCATTGTCATCGCTTGTCTTTCTCTTGCTTCAAAGATGAAGAACACACCCTTCTCACTTTCTGATTTTCAGAAAGAAGGTTACATATTTGATGCTCGAAGCATTCAGAAAATGGAGCTTCTTATTCTTGGAGCTCTGGAATGGCGTATGAGGTCCATTACACCATTTCCATTCTTGCATTTCTTCATTTCTGTGTCAAAACTCAATGACCCATCAGTGAAACAAGCACTCAAAATTCGAGCTTCAGAGATAATCCTTAATACTCACAGTGATATTAAATTTTCAGAGTATAAACCTTCAATTATTGCAGCATCAGCACTTATCTCTGCATCTCATGAGTTATTTCCACTGCAATATTCTACTCTCAGAGCATCAGTTCTAGCTTGTGAGTATCTAGATGAGGAGATATTATCCAAGTGCTTCAATTTCATCCAAGAGTTGAAGATACAAGCAAATGCTTCAGTAATAGACACGAGCCTTAGAGCACAGAAGCAGAGAATTTGA 786 0.383 MEFDLEDPISCFKENQTCSISELFASESDYMPSPNHLSSADFHVSFRCEVSVIQVHFSCNLDPFVSYLAINYLDRFMSRQEIPRLQQENSWFLRVIVIACLSLASKMKNTPFSLSDFQKEGYIFDARSIQKMELLILGALEWRMRSITPFPFLHFFISVSKLNDPSVKQALKIRASEIILNTHSDIKFSEYKPSIIAASALISASHELFPLQYSTLRASVLACEYLDEEILSKCFNFIQELKIQANASVIDTSLRAQKQRI* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1888 261 Pfam Cyclin, C-terminal domain 147 246 IPR004367 -
Apr3g1888 261 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 5 241 - -
Apr3g1888 261 SMART cyclin_7 50 138 IPR013763 -
Apr3g1888 261 Pfam Cyclin, N-terminal domain 23 144 IPR006671 -
Apr3g1888 261 Gene3D - 22 236 - -
Apr3g1888 261 SUPERFAMILY Cyclin-like 129 241 IPR036915 -
Apr3g1888 261 SMART Cyclin_C_2 147 256 IPR004367 -
Apr3g1888 261 Gene3D - 33 145 - -
Apr3g1888 261 SUPERFAMILY Cyclin-like 20 144 IPR036915 -
Apr3g1888 261 CDD CYCLIN 53 137 IPR013763 -
Apr3g1888 261 PANTHER CYCLINS 5 241 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1888 Apr-Chr3 34884978 34886196 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1888 1 260 Core Cell Cycle Gene Families AT4G03270 38.989 2.51e-52 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1888 K18812 - gmx:100799763 315.079