Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1870 ATGCACGGGAGGTATGCGGAGAGATCAGGCGGTGTGGCGAGAGAGAAGCGAAGTTTGGATTCGGCTTCCTCCGAAGAAGGACAACCTGATCGGAAGCGACCTGCTTTGGCTAGCGTAATTGTTGAAGCCCTGAAGGTGGACAGTCTGCAGAAACTTTGTTCATCACTGGAGCCTATTCTACGCAGAGTTGTTAGTGAAGAAGTCGAGCGTGCCTTGGCAAAACTAGGCCCTTCCAAGCTGTCTGGCAGGTCTTCTCCGAAGCGTATTGAAGGCCCTGATGGCAAAAATTTACAGTTGCACTTCAAGACCAGGCTGTCCCTTCCCCTCTTTACTGGGGGCAAAGTAGAGGGCGAGCAAGGGGCAGCCATACATATTGTTTTAATTGAAGCAAACACAGGCCATGTTGTCACATCAGGCCCAGAGTCATGTGCCAAACTAGACGTTATTGTGCTAGAGGGAGATTTCAATCATGAGGATGATGATAATTGGAGTGAAGATGAGTTTGATAGTCATATTGTGAAAGAGCGGGAAGGAAAAAGGCCTCTGCTAACCGGTGATCTGCAAATCACCCTGAAGGATGGTGTAGGAACACTTGGTGAGCTTACATTTACTGATAACTCTAGCTGGATAAGGAGTAGGAAGTTCAGATTGGGGCTGAAAGTTTCCTCAGGTTGTTGTGAGGGGATGCGTATTCGTGAAGCCAAATCAGAAGCTTTCACCGTTAAGGATCATCGTGGAGAATTATACAAGAAACACTACCCACCCGCCTTGAATGATGAGGTCTGGAGACTGGAGAAGATTGGCAAGGATGGGTCTTTTCACAAAAGGCTAAATAAAGCTGGAATATTTACTGTTGAAGACTTCCTTAGATTTGTGGTCAGAGACCCTCAGAGACTGCGGAATATTCTTGGGAGCGGCATGTCAAATAAGATGTGGGATATTCTTGTTGAGCATGCAAAGACTTGTATTCTCAGTGGAAAACTTTATGTATACTATCCTGATGATGCAAGAAATGTGGGTGTTGTTTTCAATAACATTTATGAATTGAGTGGTTTAATTGCCAACGATCAATATTACTCAGCTGATTCCCTCTCTGACAGCCAAAAGGTTTATGTAGACACGTTGGTGAAGAAGGCCTACGACAATTGGATGCATGTTATTGAGTATGATGGGAAGTCTCTGCTAAATTACAATCAAGATAAGCCTTTGGACACTGCTTATCCTCAGCCTGCAATGGGCTCCCATGAATATTCAAACTCACCTCAGCAGATTTCCATCTCAACTTTGCCACTTCCGGTACATGGTGGCCACCCTTCAATGGAGTCAGAAGTAACAGTTGGAGTTGGAGGTTATCATGATGGGACAAGTACCAGATTCTCCATGCAACCACAGAATGCTAATCTTAACACATCCGTTCAGTTTGATGACAATACATTTCCTCTACAAAACCAATTAATGAGTGTTTCACACCAAGCTCAACTTCCAAGAAACGAAAATGGGCTGACTCTTGGTCCTCCACAATCAGTCACACATGGCTTCCAGACTGCCAGCATTTCAAATCCTACTTATAGAGGAGTTGAAGAGTTCTTCCCAGAGGAGGAGATTCGTATTAGAAGTCATGAGATGCTAGAAAATGAAGATATGCAACATCTGCTCCGTATTTTTAATATGGGAGGCCAAGCGCATCATTCCTTTAATACACACGAAGATGGGTTCCCTAGTTCATCTGCATACATGCCTCCAACCCCCATGAGCTACAATTTTGACGATGAGCCTAACCGCTCCTCAGGCAAAGCTGTTGTGGGGTGGCTCAAGCTTAAGGCAGCTTTAAGATGGGGTATTTTTATTCGGAAGAAAGCTGCTGAGAGACGGGCACAACTTGTTGAATTGGATGACTCGTAG 1902 0.4485 MHGRYAERSGGVAREKRSLDSASSEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPSKLSGRSSPKRIEGPDGKNLQLHFKTRLSLPLFTGGKVEGEQGAAIHIVLIEANTGHVVTSGPESCAKLDVIVLEGDFNHEDDDNWSEDEFDSHIVKEREGKRPLLTGDLQITLKDGVGTLGELTFTDNSSWIRSRKFRLGLKVSSGCCEGMRIREAKSEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDFLRFVVRDPQRLRNILGSGMSNKMWDILVEHAKTCILSGKLYVYYPDDARNVGVVFNNIYELSGLIANDQYYSADSLSDSQKVYVDTLVKKAYDNWMHVIEYDGKSLLNYNQDKPLDTAYPQPAMGSHEYSNSPQQISISTLPLPVHGGHPSMESEVTVGVGGYHDGTSTRFSMQPQNANLNTSVQFDDNTFPLQNQLMSVSHQAQLPRNENGLTLGPPQSVTHGFQTASISNPTYRGVEEFFPEEEIRIRSHEMLENEDMQHLLRIFNMGGQAHHSFNTHEDGFPSSSAYMPPTPMSYNFDDEPNRSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLVELDDS* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1870 633 PANTHER OS02G0177800 PROTEIN 2 631 IPR012416 GO:0005516
Apr3g1870 633 Pfam Calmodulin binding protein central domain 256 322 IPR046830 -
Apr3g1870 633 Pfam Calmodulin binding protein-like N-terminal domain 97 244 IPR046831 -
Apr3g1870 633 MobiDBLite consensus disorder prediction 1 32 - -
Apr3g1870 633 PANTHER CALMODULIN-BINDING PROTEIN 2 631 - -
Apr3g1870 633 Pfam Calmodulin binding protein C-terminal domain 327 389 IPR046829 -
Apr3g1870 633 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1870 Apr-Chr3 34652760 34660713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1870 14 628 Calmodulin-binding Proteins AT5G57580 63.411 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1870 - - gmx:100812605 1100.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1870 3 34652760 34660713 Apr1g1356 1 22523836 22529620 PCT