Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1834 ATGTGTGATACAATGCCAGGGGAAATGGAAAGTGAGAATTTTTACTCTGTATCTCAGAGCCTGCAATCAGCAGAAGCAAAACGAAACGTCTATTTGAAAGTTAACCCACCTGTTACCCTCAAGTTTGAAGATGTTGTGCATAAAATTAAAATTAGCAAAGGGGAAGGCTTGTTATGCAAAAAGAAGGTAAGTTCTGAGGAGAGAGTGGTGTTGAAAGGGGTTAGTGGTGTTGTTTTTCCAGGTGAATTGTTGGTCATTTTAGGCCCTTCTGGGTGTGGCAAAACAACTTTGATAACTGCATTAGGAGGCCGGCTAAATGATAGTGTCTCCAGTGGAACCATAACCTATAATGGAAAACCCCTCACAAAATTAATGAAGCATAACATGGGATTTGTTGCTCAACATGATGTCTTCTATCCTCACCTGTCTGTCAGTGAGACACTAGTCTTTTCAGCTCTTCTTCTCTTGCCAAATAGCCTCTCTAAAGAAGAGAAAATCTCAAATGCTGAGGCAGTTATGAAAGAACTTGACCTGACTCATTGTAAGGACACTATAATGGGAGGGCCACTCTTAAGGGGAGTTTCAGGTGGAGAAAGAAAAAGGGTTAGCATAGGGCAAGAACTTTTAACTAATCCAAGTCTCTTGCTTGTTGATGAACCCACTTCAGGCCTTGACTCAACCACTGCTAGAAGAATTGTGTTAACTCTGTGTGGGTTAGCTAAAGAGGGAAGGACTGTCGTAATGACTATTCACCAACCTTCCAGTAAACTTTTTTACATGTTCCAGAAGATTTTGCTATTGTCAGATGGTAGAAGCCTGTACTTTGGGAAAGGAGAAAATGTTATGAATTACTTCTCCGGTATTGGTTATGCTCCATCCCTAGCCATGAATCCTACTGATTTCTTACTTGATCTTGCAAATGGTATATATTCGGGAAATTCGGAAGAGGATACAAATGCTACAAAACAAGCACTATTATCTGCTTTTGAATGTAACCTTTCATATCAAGTAAAGATGGAACTCCAAATTTCCAGGGTTTCATTTCATGACAATTCAGATGAGAAATTTGGTCAATGGTGCACAACATGGTGGCAGCAGTTTACCATATTACTAAGGAGGAGTTTCAAAGAAAGAAAGAATGAGCAATTTTCAGCCCAAAAACTCTGTCATGTTTTGGCCTTATCATTCTTTGCAGGCCTTCTCTGGTGGCAATCTAGAGTTGATCAAATGCAAGACCTGGTAGGACTACTTTTCTACTACACACAATTCTGTGGATTCTTCCCAATGGTCCTGTCCATCTTTACCTTTCCCCGTGACCGTGAAATGATAGTAAAGGAAAGGTCTTCCTACATGTACAGATTCTCATCTTACTTCATAGCAATTAATGTTGTTGACCTTCCAGTGCAGCTAGCCTTGCCAACCCTTTTTGTCACCATTACTTATTGGATGGGAGGGTTAAAAGCCAGTGCTTCAATTTTCTTCCAAACTCTAGCAGTTGCTCTTCTCTATGCATTGGTATCACAAGGTATTGGCCTTGCTATTGGTGCAGTGCTGGTAAATAATCAAAGAGTAGCTGCTACAGTTGGGGCTGTGGTCATGACATTATTTGTTCTAGTGAATGGCTATTTTGTGCAGAATACACCAGCATTTGTGTCATGGATAAAGTGCATATCTCATAGCTATTATTCCTATAAGCTTTTGTTGGGTTCACAGTTCAAGGATTATAACACATACCTTTGTGGTTCCAATGGTACCTGCTCAGTTGGAAAGTATCCTACAATTAAGCATGTAGGCATCGACAAGCAAGGCTTCTCTGTTGCAGCCTTGGTGGCAATGCTTGTAGGCTACAGAATTATTGCCTATGTTGCCCTTGTGATTGGCACCAAACAGAACTAG 1896 0.4061 MCDTMPGEMESENFYSVSQSLQSAEAKRNVYLKVNPPVTLKFEDVVHKIKISKGEGLLCKKKVSSEERVVLKGVSGVVFPGELLVILGPSGCGKTTLITALGGRLNDSVSSGTITYNGKPLTKLMKHNMGFVAQHDVFYPHLSVSETLVFSALLLLPNSLSKEEKISNAEAVMKELDLTHCKDTIMGGPLLRGVSGGERKRVSIGQELLTNPSLLLVDEPTSGLDSTTARRIVLTLCGLAKEGRTVVMTIHQPSSKLFYMFQKILLLSDGRSLYFGKGENVMNYFSGIGYAPSLAMNPTDFLLDLANGIYSGNSEEDTNATKQALLSAFECNLSYQVKMELQISRVSFHDNSDEKFGQWCTTWWQQFTILLRRSFKERKNEQFSAQKLCHVLALSFFAGLLWWQSRVDQMQDLVGLLFYYTQFCGFFPMVLSIFTFPRDREMIVKERSSYMYRFSSYFIAINVVDLPVQLALPTLFVTITYWMGGLKASASIFFQTLAVALLYALVSQGIGLAIGAVLVNNQRVAATVGAVVMTLFVLVNGYFVQNTPAFVSWIKCISHSYYSYKLLLGSQFKDYNTYLCGSNGTCSVGKYPTIKHVGIDKQGFSVAALVAMLVGYRIIAYVALVIGTKQN* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1834 631 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 286 IPR027417 -
Apr3g1834 631 Pfam ABC-2 type transporter 251 348 IPR043926 GO:0140359
Apr3g1834 631 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 40 294 IPR003439 GO:0005524
Apr3g1834 631 ProSitePatterns ABC transporters family signature. 194 208 IPR017871 GO:0005524
Apr3g1834 631 Pfam ABC-2 type transporter 365 572 IPR013525 GO:0016020|GO:0140359
Apr3g1834 631 Pfam ABC transporter 71 222 IPR003439 GO:0005524
Apr3g1834 631 Gene3D - 59 287 IPR027417 -
Apr3g1834 631 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 24 627 - -
Apr3g1834 631 SMART AAA_5 80 271 IPR003593 -
Apr3g1834 631 CDD ABCG_EPDR 60 276 - -
Apr3g1834 631 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 24 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1834 Apr-Chr3 34225387 34228108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1834 81 288 Calmodulin-binding Proteins AT2G36910 26.267 5.77e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1834 K05681 - gmx:100800295 1013.45