Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1823 ATGAAACATAATCTGCAGACAGAGTTGTTAACAAGTAAAAACATGCATTCATTCCCCATGGTTTTCTTCGACACCTTTCTGCTCTTTCTTTCTCTTATCCTCATCATCAAACGATATTCCAATGCATCAACCACCAAAAACTCACCCCCTTCACCTCCAACGTTACCTCTTATAGGTAACCTTCATCAACTAGGTTTGCTCCCACACCGCACACTCCATTCTTTAGCCCAAAAATATGGCCCTTTAATGCTCCTCCATTTTGGGAAGGTGCCAGCACTTGTGGTATCTTCTGCTGAAGCAGCGCGTGAGGTGATGAAAACTCACGACCTTGTTGTCTCCGATAGGCCACAAAGTAAAGTGTGGAAGATTCTCTTTTATGATACCAAAGACATGGCAAGTGCTTCATATGGGAAGAGTTGGAGGAACTTAAGGAGTTTGAGTGTGTGTCACCTTTTTAGTAGCAAAAAGGTTCAATCTTTTGGTCGTGTGAGAGAGGAGGAAACTTTAAGAATGATGGGACATATTAAGAAGTGTTGTTCTTCTTCCTTGCAGGTGAATTTATCTGAGTTGCTTGGCTTATTGTCGAATGATGTAATATGTAGAGTGGCTCTTGGAAGGAGATACCGTGGAGTAGAAGGGAAGGGGTTTGAAAGGGTTCTTTTGGAGTTTGATGAGTTAGTGGGGACTGTGTCTATAGGGGATTATATGCCTTGGCTTGATTGGTTGAGCAAGGTTAATGGTTTGTATGGTAGGGCAAAGAGGGTGGCCAAATATTTGGACCAATTTTTAGATGAAGTAATTGACGAGCATATCAGTGGTGGGTCTAGGAATAGCAAAGATGGGCTTGAGGCAGAGCGTGATTTTGTGGATGTTTTGCTTTCCCTCGAAAAGACTGATACTGAAGGCTTCCCTGTCGATAGAAATGTAATAAAGGGTTTGATAGTGGACATGTTTGTTGCAGGTACTGAGACTACTCATGCAACAATGGAGTGGGCAATGACAGAACTATTGAAGCATCCAATTGTGATGCATAAATTGCAAAACGAGGTGAGAAGTGTGGTTGGTAACAAGACTCACGTAACTGAGGATGATTTGGGTCAGATGAAGTACTTGAAGGCTGTGATTAAGGAAACGTTTCGCCATCATCCCTCAGTTCCTGTAATTCCTCGAAAATCTTCTGAAGATATCAAAGTGAACGGCTATGACATTGCTGCTGGCACACAGGTATTAGTGAATGTTTGGGCAATTGGAAGAGACCCTTCTTCATGGTACCAACCTCTAGAGTTTAATCCAGAGAGATTCCTTAACAATTCAATTGATTTCAAAGGACATGATTTTGAGTTAATCCCTTTTGGAGCTGGAAGGAGGGGTTGCCCTGGAATGCTATTTGCCATTGCTACTATTGAGATGGTAATAGCAAACCTTGTCCACCAATTTGATTGGGCACTGCCTTGTGGGGAGGACTTGAATATGTCTGAAAATCCTGGCATGGCTATTCTTAGAAAATTTCCACTCATGGCCGTAGCAACTCTACATGATAGAAATTAA 1548 0.4212 MKHNLQTELLTSKNMHSFPMVFFDTFLLFLSLILIIKRYSNASTTKNSPPSPPTLPLIGNLHQLGLLPHRTLHSLAQKYGPLMLLHFGKVPALVVSSAEAAREVMKTHDLVVSDRPQSKVWKILFYDTKDMASASYGKSWRNLRSLSVCHLFSSKKVQSFGRVREEETLRMMGHIKKCCSSSLQVNLSELLGLLSNDVICRVALGRRYRGVEGKGFERVLLEFDELVGTVSIGDYMPWLDWLSKVNGLYGRAKRVAKYLDQFLDEVIDEHISGGSRNSKDGLEAERDFVDVLLSLEKTDTEGFPVDRNVIKGLIVDMFVAGTETTHATMEWAMTELLKHPIVMHKLQNEVRSVVGNKTHVTEDDLGQMKYLKAVIKETFRHHPSVPVIPRKSSEDIKVNGYDIAAGTQVLVNVWAIGRDPSSWYQPLEFNPERFLNNSIDFKGHDFELIPFGAGRRGCPGMLFAIATIEMVIANLVHQFDWALPCGEDLNMSENPGMAILRKFPLMAVATLHDRN* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1823 515 Gene3D Cytochrome P450 39 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1823 515 PANTHER CYTOCHROME P450 71B11-RELATED 25 513 - -
Apr3g1823 515 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1823 515 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1823 515 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1823 515 PANTHER CYTOCHROME P450 FAMILY PROTEIN 25 513 - -
Apr3g1823 515 SUPERFAMILY Cytochrome P450 49 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1823 515 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1823 515 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1823 515 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1823 515 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1823 515 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1823 515 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1823 515 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1823 515 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1823 515 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1823 515 Pfam Cytochrome P450 49 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g1823 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1823 Apr-Chr3 34116533 34119009 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1823 47 510 Cytochrome P450 AT3G48310 50.746 1.18e-169 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1823 - - gmx:100819183 690.649