Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1791 ATGCAAAATCAACAACTACACAAAGAAGACGACGATGATGGCCCGCCACCAGGGTGGCAACCCATCCCCACTCCGCCACCACCACGACCTTCCGGTTCAGCTCAAATGATTTGTGGTTCGTGTCGTCGCCTGCTTTCATATCCACGTGGTGCCAAACATGTCAAATGTTCATGCTGTCAAACGGTCAACATTGTATTTGAAGCTGATCAGGTTGGACAAGTTAAGTGTGGTAGTTGTGCAGTATTGCTAATGTACCCATATGGTTCTTCACAAGTTAGATGTTCCTCATGCCGGTTTGTGACAGAAATTGGGGCACACAACAGGCGGCCTCCATGGTCTGTGCAACAAAGGAAACCAACTCCTTCCAAGGCTGGTTGTTAG 381 0.4856 MQNQQLHKEDDDDGPPPGWQPIPTPPPPRPSGSAQMICGSCRRLLSYPRGAKHVKCSCCQTVNIVFEADQVGQVKCGSCAVLLMYPYGSSQVRCSSCRFVTEIGAHNRRPPWSVQQRKPTPSKAGC* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1791 126 PANTHER PROTEIN LOL2 23 121 - -
Apr3g1791 126 MobiDBLite consensus disorder prediction 16 32 - -
Apr3g1791 126 PANTHER PROTEIN LSD1 23 121 IPR040319 -
Apr3g1791 126 MobiDBLite consensus disorder prediction 1 15 - -
Apr3g1791 126 Pfam LSD1 zinc finger 38 62 IPR005735 -
Apr3g1791 126 Pfam LSD1 zinc finger 76 100 IPR005735 -
Apr3g1791 126 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 35 65 IPR005735 -
Apr3g1791 126 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 73 101 IPR005735 -
Apr3g1791 126 MobiDBLite consensus disorder prediction 1 34 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Apr3g1791 zf-LSD1 2.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1791 - - gmx:100780865 208.379