Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1781 ATGGCGGAGATTTCAACTTCGGGGTACAAGGATTACGTGGCAGGCTTGCTTGCTGGTGTTGCCGCTGTAGCCATTGGCCATCCCTTTGACACCGTAAAGGTGAAGCTGCAAAAACACAATACAGAAGCACACGCGATTCATTATAGAAATGGATTGCATTGCACTGCTAGGATACTGAAGACAGAAGGAATCAAAGGACTTTATAGAGGAGCAACATCATCATTTGTTGGGATGTCAGTTGAAGGATCACTTTTTTTTGGTATTTATTCCCAGACAAAACAGTACCTTCAGGGGGGAGTTCAAAGTGGAGAACCACGGCCTCAAGTGATTATACCATCTGCAGCTTTTAGTGGTGCCATCATCAGTTTTGTATTAGGTCCAACAGAGCTGATAAAGTGTAGGATGCAGATCCAAGGCACCGATTCTTTGGTTCCTAAGTCAAGTAGATACAGTAGTCCCCTTGATTGTGCCCTTAAAACTGTAAAAACTGAAGGGGTGAAAGGAATTTTTCGTGGAGGTTGTACCACGTTGCTTAGAGAATCTATAGGGAATGCTGTCTTTTTCAGTGTATACGAATATGTGCGTTATAACATGCATTCACACATCAAGACTACTTCATCCAATTACAGCAACCTGATTGATATTGGCATTGGAATCGTTACTGGTGGCCTTGGTGGTGTGGCTTTTTGGTTGACGGTTTTGCCTCTTGACGTGGCAAAGACTTTAATTCAGACAAACCCTGATAAAAACTGTCCAAGAAATCCTTTTCGGGTCTTGAGTTCAATCTACGAGAGGAATGGATTGAAGGGGTGCTATACAGGTTTGGGTCCTACTATAAGTCGAGCATTTCCAGCTAATGCTGCAACAATTGTGGCGTGGGAGCTAGCAATGAAAATGCTAGGCATTAAGCATGACTGA 918 0.4325 MAEISTSGYKDYVAGLLAGVAAVAIGHPFDTVKVKLQKHNTEAHAIHYRNGLHCTARILKTEGIKGLYRGATSSFVGMSVEGSLFFGIYSQTKQYLQGGVQSGEPRPQVIIPSAAFSGAIISFVLGPTELIKCRMQIQGTDSLVPKSSRYSSPLDCALKTVKTEGVKGIFRGGCTTLLRESIGNAVFFSVYEYVRYNMHSHIKTTSSNYSNLIDIGIGIVTGGLGGVAFWLTVLPLDVAKTLIQTNPDKNCPRNPFRVLSSIYERNGLKGCYTGLGPTISRAFPANAATIVAWELAMKMLGIKHD* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1781 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 299 IPR018108 -
Apr3g1781 305 PANTHER - 132 304 - -
Apr3g1781 305 PANTHER - 6 132 - -
Apr3g1781 305 Pfam Mitochondrial carrier protein 113 195 IPR018108 -
Apr3g1781 305 Pfam Mitochondrial carrier protein 9 97 IPR018108 -
Apr3g1781 305 Pfam Mitochondrial carrier protein 219 301 IPR018108 -
Apr3g1781 305 SUPERFAMILY Mitochondrial carrier 8 294 IPR023395 -
Apr3g1781 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 197 IPR018108 -
Apr3g1781 305 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 132 304 - -
Apr3g1781 305 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 6 132 - -
Apr3g1781 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 6 95 IPR018108 -
Apr3g1781 305 Gene3D Mitochondrial carrier domain 110 305 IPR023395 -
Apr3g1781 305 Gene3D Mitochondrial carrier domain 3 109 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1781 Apr-Chr3 33636998 33642980 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1781 26 300 Antiporters AT1G79900 29.537 1.83e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1781 K15109 - gmx:100815087 538.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1781 3 33636998 33642980 Apr3g1781 3 33636998 33642980 ECH