Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1768 ATGGATTCTGACTTCTGGACCTCGCGTCTTGCCGCCGCCAAACGCCAATACACGCTTCAGCATCACCATCCCAGTTCCCATTTAGATCGGCTGGGAATCGATGATTTTGATGTGGAAGAAGAGGTGCGACCCGATTTCCCGTGTCCGTATTGTTACGAAGACTTTGACCTTGCGTCCTTGTGTTCTCATCTTGAAGACGAGCATTCGTGTGAATCAAGAGTCACTATTTGTCCCATATGCTCAGTTAAAGTTGCACGCGACATGTTGAGTCACATAATGCTGCAACATGGGCACTTATTTAAGTTACAGAGAAGGCGAAGATTAAGGAGAGTTGCTATTCCGAACAGTCAGACATTATCTCTTTTGGGTCGAGATCTTCGTGAGGCGCATTTACAGGTGCTTCTTGGTGGTGGTGGTGGATATCGGTCAAACAGTGCCACTGTATCAAATGCAGCCACTGATCCATTCCTATCCTCTTTTATTTTGAATTTCCCTGCCTGTGAAGCAGAAGAAATTTCTAAATCTGTGGTGACAAGCGTTGAAGATTCTTCTACAAAAAACACGGCACCTGCACATATCTGGAAATCAAGTTTTGATCCTTCACTGAGCATTGAAGAGCGGGAGAAAAGGATAAGACAAGCTGCTGGGAGATCTGGTTTTGTGCAGGATTTGTTTCTCTCAACTTTGTTAGGCGACTAA 699 0.4506 MDSDFWTSRLAAAKRQYTLQHHHPSSHLDRLGIDDFDVEEEVRPDFPCPYCYEDFDLASLCSHLEDEHSCESRVTICPICSVKVARDMLSHIMLQHGHLFKLQRRRRLRRVAIPNSQTLSLLGRDLREAHLQVLLGGGGGYRSNSATVSNAATDPFLSSFILNFPACEAEEISKSVVTSVEDSSTKNTAPAHIWKSSFDPSLSIEEREKRIRQAAGRSGFVQDLFLSTLLGD* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1768 232 Pfam Drought induced 19 protein (Di19), zinc-binding 45 97 IPR008598 -
Apr3g1768 232 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 231 - -
Apr3g1768 232 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 231 IPR033347 -
Apr3g1768 232 SUPERFAMILY TRAF domain-like 46 105 - -
Apr3g1768 232 Pfam Stress-induced protein Di19, C-terminal 119 229 IPR027935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1768 Apr-Chr3 33534907 33538610 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Apr3g1768 Di19_C 9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1768 - - gmx:100792230 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1768 3 33534907 33538610 Apr3g1768 3 33534907 33538610 ECH