Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1759 ATGACATGGTGCAATGACTCAGATGAGGAGAGGGGCATTGAACTGGTCATGCCCACTATTACTCCTAGAACTACTAAGACTCTTGTTACTGACATTAAACCAACCGAAATTCGAACCATAAGTTGCCCCTCATGTGGCCATAACGTTGAATTCCAAGATCAGGCTGGAATCAATGACTTGCCGGGTTTACCAGCTGGGGTGAGGTTTGATCCGAATGACCAAGAGATATTAGAGCATTTGGAAGCAAAAATTCTGTCTGATGTGCCAAAGCTCCATCCCCTTATTGATGAGTTCATACCAACGCTTGAAGGCGAAAACGGGATCTGTTATACTCACCCAGAAAAGCTTCCAGGTGTAAGCAAAGATGGACAGATCCGCCACTTCTTTCACAGGCCTTCTAAAGCTTACACAACCGGAACAAGGAAAAGAAGAAAGGTTCACACTGATGAAGAAGGAAGCGAAACAAGATGGCACAAAACAGGCAAAACAAGACCAGTTTTTGTTGGTGGTGCTGTAAAGGGTTTCAAAAAGATACTGGTCCTCTACACCAACTATGGGAGGCAAAAGAAACCTGAGAAGACTAACTGGGTGATGCATCAATACCATCTTGGCAGCAACGAAGAAGAGAAAGATGGAGAATTAGTGGTTTCGAAGGTCTTCTACCAAACACAACCTCGACAATGTGGTAATTCCATTATAAAGCAGGATCCTTACAATGAAAAAAGATTGACTCACCAAAGTGTCCACGATGACAATATAATATCTAAAAATGTAGCTCTTATGGATTACTACAACACTCCCTTCATAAATTATGACCATGTGGGCGGTCATAATAATGGGGAAAGTTCACCTCAACTTATTCCAAACTTGGTTGTGCAAGGTGATAGCTCTTCTTTCATTCGATTAGCAATGGATGCAAACAAAGCCAGGCTTGACAGGAAATAG 945 0.4233 MTWCNDSDEERGIELVMPTITPRTTKTLVTDIKPTEIRTISCPSCGHNVEFQDQAGINDLPGLPAGVRFDPNDQEILEHLEAKILSDVPKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRPVFVGGAVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGELVVSKVFYQTQPRQCGNSIIKQDPYNEKRLTHQSVHDDNIISKNVALMDYYNTPFINYDHVGGHNNGESSPQLIPNLVVQGDSSSFIRLAMDANKARLDRK* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1759 314 SUPERFAMILY NAC domain 58 222 IPR036093 GO:0003677|GO:0006355
Apr3g1759 314 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 298 - -
Apr3g1759 314 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 298 IPR044799 GO:0003700
Apr3g1759 314 Gene3D NAC domain 72 226 IPR036093 GO:0003677|GO:0006355
Apr3g1759 314 Pfam No apical meristem (NAM) protein 64 203 IPR003441 GO:0003677|GO:0006355
Apr3g1759 314 ProSiteProfiles NAC domain profile. 63 222 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1759 Apr-Chr3 33376157 33379578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1759 1 232 NAC Transcription Factor Family AT4G28500 72.103 1.03e-125 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr3g1759 NAM 6.5e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1759 - - gmx:100795920 553.903