Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1752 ATGGATTTCAGTACCAACGGCACTGAAGAGAGTGAACTCTACCACGCTCAAATCCATTTGTACAAGCACGTGTACAACTTCGTTAGTTCCATGGCTCTCAAATCTGCCATGGAGCTAGGCATAGCAGACGTAATCCACAACCACGGAAAACCCATGACTCTCGCTGAATTAGTCTCAGCACTGAAACTCCACCCCCCAAAAGTCAATGCCCTCCACCGCTTCTTGCGCCTTCTAACACACAACGGATTCTTCGTCAAAACGACAGTGCCGTCAACGAACGGTAAAGAAGGAGAACGCGAAACGGCATATGATCTGACTCCACCTTCCAAGCTTCTAATCAGAGGCAAGTCAACATGCTTAGCACCCATAGTTCGAGGAGCACTTCACCCAAGCTCGCTTGACATGTGGGGCGCTTCCAAGAAATGGTTCACTGAGGAAAAGGAACTTACTCTGTTCGAGAGCGCTACAGGGGAGAGTTTCTGGGACTTTCTGAACAAAGACTCTGAGTCTGACACGTTGAGCATGTTTCAAGAGGCCATGGCCGCTGATTCTAGAGTTTTCAAGCTTGCTCTCCATGAATGCAAACACGTGTTTGAGGGATTGGGTTCCCTTGTTGACGTGGGTGGTGGCACTGGTGGCGTAACGAGGCTCATCCATGAAGCCTTCCCTCACTTGAAATGCATTGTCTTTGATCAACCACAGGTTGTGGGTAATTTGACAGAAACCGATAATTTGAGTTTTGTTGGGGGAGATATGTTCAAGTCCGTCCCTTCTGCAGATGCAGTTTTACTCAAGTGGGTTCTTCATGATTGGAATGATGAGCTCGCCCTGAAGATATTGAAGAACTGCAAAGAAGCTATTTCGGGGAAAGGAAAAGAAGGGAAGGTGATAATCATAGACATAGCAATTGATGAAACAAGTGATGATCGTGAATTGACTGAGTTGAAGTTGGACTACGACTTGGTGATGTTGACTATGTTCAATGGAAAAGAAAGAGAAATGAAAGAATGGAAGAAACTCATATACGACGCCGGATTCAGCAGCTACAAGATTACCCCCATTTGTGGTTTCAAGTCTCTCATCGAAGTTTATCCTTAA 1098 0.459 MDFSTNGTEESELYHAQIHLYKHVYNFVSSMALKSAMELGIADVIHNHGKPMTLAELVSALKLHPPKVNALHRFLRLLTHNGFFVKTTVPSTNGKEGERETAYDLTPPSKLLIRGKSTCLAPIVRGALHPSSLDMWGASKKWFTEEKELTLFESATGESFWDFLNKDSESDTLSMFQEAMAADSRVFKLALHECKHVFEGLGSLVDVGGGTGGVTRLIHEAFPHLKCIVFDQPQVVGNLTETDNLSFVGGDMFKSVPSADAVLLKWVLHDWNDELALKILKNCKEAISGKGKEGKVIIIDIAIDETSDDRELTELKLDYDLVMLTMFNGKEREMKEWKKLIYDAGFSSYKITPICGFKSLIEVYP* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1752 365 PIRSF O-mtase 1 365 IPR016461 GO:0008168
Apr3g1752 365 PANTHER O-METHYLTRANSFERASE 5 365 IPR016461 GO:0008168
Apr3g1752 365 Pfam O-methyltransferase domain 137 347 IPR001077 GO:0008171
Apr3g1752 365 SUPERFAMILY "Winged helix" DNA-binding domain 10 116 IPR036390 -
Apr3g1752 365 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 5 365 - -
Apr3g1752 365 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Apr3g1752 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 364 IPR029063 -
Apr3g1752 365 Gene3D - 2 112 IPR036388 -
Apr3g1752 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 365 IPR016461 GO:0008168
Apr3g1752 365 Gene3D Vaccinia Virus protein VP39 113 365 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1752 Apr-Chr3 33272433 33273873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1752 28 352 Monolignol Biosynthesis Gene Families AT5G54160 33.841 1.95e-44 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1752 K22588 - gmx:100807589 608.601