Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1741 ATGGCTATTCATGCCGGTTCTGAAGAGATTCTTGAGAATGTGTGGTCTAAAATTATCAGCGGTGATACAGCAGAATCTCCCAACTCATGGGAAGAACATCGTAATCCCGATGGAAGAGAAGGGTCAATGGAGATTCTGAAAAGGCTTCCAAGTTTAGGGAGATGGATATCAATGGGGGCTGACTTTTGGGAAGAAATTTTACAAAGGGTTGTAATTGATGGAAACAATACTGAAGATTCTGGTGACACCCTTATGGGAATTGGCAGTGGTAAACCCAATAACAAGGTAGAGAATGGTGTGAGAGAGGAAAAGGTGGTAGAAAAACACTACAGGGGAGTAAGGAGAAGGCCATGGGGTAAATATGCAGCAGAGATAAGAGACTCTTCCAAGAAAGGTGCTAGTACTAGAGTTTGGCTTGGAACATTTGACACTGCTGAAGAAGCTGCTCTAGCTTATGACAAGGCTTCTTTGAGAATTAGAGGTCCAAAGGCATACCTCAATTTCCCTCTTGAGACTGTGTCACAGGCTTTAGGCACTGACCACAAAGAAAATTCTTGCAATGCGCACAAGAGAAAATCACGGGGACAGGAAGAAGAATTTGTGGATATGGTGAATGAAGAACATGCAAACAAAAAATTGGCAAGATGGGAAAGCGTGCTAGAAAATGAAGTTGATGTTTTTGTGTTTCAGGACTTGGGGAGTGATTACTTAGAATATTTGCTATCTACTTTTTGA 735 0.4177 MAIHAGSEEILENVWSKIISGDTAESPNSWEEHRNPDGREGSMEILKRLPSLGRWISMGADFWEEILQRVVIDGNNTEDSGDTLMGIGSGKPNNKVENGVREEKVVEKHYRGVRRRPWGKYAAEIRDSSKKGASTRVWLGTFDTAEEAALAYDKASLRIRGPKAYLNFPLETVSQALGTDHKENSCNAHKRKSRGQEEEFVDMVNEEHANKKLARWESVLENEVDVFVFQDLGSDYLEYLLSTF* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1741 244 SUPERFAMILY DNA-binding domain 109 171 IPR016177 GO:0003677
Apr3g1741 244 PRINTS Ethylene responsive element binding protein signature 110 121 IPR001471 GO:0003700|GO:0006355
Apr3g1741 244 PRINTS Ethylene responsive element binding protein signature 135 151 IPR001471 GO:0003700|GO:0006355
Apr3g1741 244 MobiDBLite consensus disorder prediction 27 42 - -
Apr3g1741 244 Pfam AP2 domain 109 161 IPR001471 GO:0003700|GO:0006355
Apr3g1741 244 Gene3D AP2/ERF domain 108 171 IPR036955 GO:0003700|GO:0006355
Apr3g1741 244 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 12 244 - -
Apr3g1741 244 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF091 12 244 - -
Apr3g1741 244 SMART rav1_2 109 175 IPR001471 GO:0003700|GO:0006355
Apr3g1741 244 MobiDBLite consensus disorder prediction 22 42 - -
Apr3g1741 244 CDD AP2 108 169 IPR001471 GO:0003700|GO:0006355
Apr3g1741 244 ProSiteProfiles AP2/ERF domain profile. 109 169 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1741 Apr-Chr3 33154197 33154931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1741 9 244 AP2-EREBP Transcription Factor Family AT4G18450 34.641 3.64e-36 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr3g1741 AP2 9.5e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1741 - - lang:109334345 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1741 3 33154197 33154931 Apr3g1741 3 33154197 33154931 ECH