Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1740 ATGAAAACCCCTATTTCACATTCTTTGCTCTCTCTTTTACACCTTTTCATCCTTTGCTTGTTATGTTTTGTGGTCACAATTGAAGCCTCAAACAAGCAAGTCTCAGCCATGTATGTGTTTGGAGACTCCACAGTAGACCCAGGAAACAACAACTTCATAAACACAGCTTTCAGAAGCAACTTTCCGCCCTACGGTATAGATTTTGCCAACCAAGTTCCCACGGGAAGGTTCACTAATGGGAAGCTTGGCACTGATTTTGTTGCTTCATATCTTGGCCTAAAAGAGCTGTTGCCACCTTATTTGGATCCAAATCTTAGCGATGAAGACCTTCTAACAGGAGTCAGTTTTGCCTCTGCTGGTTCAGGCTTTGATCCACTCACTCCAATGCTGGGTAATGTAATTCCAATTGCAAAGCAGGTGGAATATTTCAGAGAATACAAAAAGAGGGTAGAGGGAATGCTTGGTAAGCAAAGAACTGAAAGACATATGAAAAATGCATTATTTTTCATCAGCGCGGGTACAAATGACTATGTCATTAACTATTTTTCGCTGCCAATGCGAAGAAAGAGATACAGCGTGCCTGGCTACGGGCAGTTCTTGTTTCAACATGTAAAAGAATTCATACAGAGTTTATGGAGAGAAGGTGCTCGAAAAATAGCTTTGGTTGGAGTACCTCCAATGGGATGTTTGCCAATCATGATCACATTCAATTCCAAAAATGTCGTTCTTGGACGTGGTTGTGTGGACAAGTATTCTGCAGTTGCAAGAGACCACAATCTGATGCTTCAACATGAATTGTTCTTAATGCAGCTAAATGTTTCTAAACCTGCTGGTGCTAAGCTCTCCTACATCGACATATATGAACCTTTGGCCAACATGATTCAAGGGCGTGAAAATCTTGGGTATGACGAGGTTGATCGTGGCTGTTGTGGAAGTGGTTTCGTCGAAGCAACGTTTTTGTGCAATGGGGTTTCGCATGTGTGTTATGATCCATCAAAATATGTGTTTTGGGATTCTATACACCCTACGGAGAAGGCCTACTACGACCTATTTATGGCAGCGCGTCCCAACATTGATGCCCTTCTCAGCGGCTAG 1095 0.4256 MKTPISHSLLSLLHLFILCLLCFVVTIEASNKQVSAMYVFGDSTVDPGNNNFINTAFRSNFPPYGIDFANQVPTGRFTNGKLGTDFVASYLGLKELLPPYLDPNLSDEDLLTGVSFASAGSGFDPLTPMLGNVIPIAKQVEYFREYKKRVEGMLGKQRTERHMKNALFFISAGTNDYVINYFSLPMRRKRYSVPGYGQFLFQHVKEFIQSLWREGARKIALVGVPPMGCLPIMITFNSKNVVLGRGCVDKYSAVARDHNLMLQHELFLMQLNVSKPAGAKLSYIDIYEPLANMIQGRENLGYDEVDRGCCGSGFVEATFLCNGVSHVCYDPSKYVFWDSIHPTEKAYYDLFMAARPNIDALLSG* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1740 364 CDD SGNH_plant_lipase_like 36 347 IPR035669 -
Apr3g1740 364 SUPERFAMILY SGNH hydrolase 161 348 - -
Apr3g1740 364 Pfam GDSL-like Lipase/Acylhydrolase 38 348 IPR001087 GO:0016788
Apr3g1740 364 Gene3D SGNH hydrolase 24 355 IPR036514 -
Apr3g1740 364 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 7 362 - -
Apr3g1740 364 PANTHER GDSL ESTERASE/LIPASE EXL3 7 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1740 Apr-Chr3 33138226 33143271 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1740 9 347 Pollen Coat Proteome AT1G75910 35.191 1.35e-59 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1740 - - gmx:100804919 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1740 3 33138226 33143271 Apr3g1740 3 33138226 33143271 ECH