Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1734 ATGAATTTCCCATCTCAAGCACTTGCAAGAATCTGCCTCTCCTATTTATTCATTTACTTTCTTTTCATTGATGGCCACCAAGCTGAGGTTACAAATGGAGACAGCGAAGTTGTATCTATAGGTGCAATCATTGATGTTAACTCACGCATTGGGAAAGAACAGCGAGTAGCCATGAACATTGCAGCTCAAAATTACAATAATACTTTTAAGAGCTACAAGCTGGCTCTTTATTTTCAGGAACCCAACAAAGAACCCGTCAGACCCACTTCCCTTGCTGAAGAGATGATTAAAACAAGGAAGGTGCAAGTGATTATAGGGATGCACACATGGATAGAAGCAGCTTCAGTAGCTGAATTAGGACGTCAAACTCAAGTTCCTGTTATATCCTTCGCAGCTCCAACCATTACCCCGCCATTGATGCCAATTCGCTGGCCTTTTTTGGTAAGCATGGTTAACAATAGTAATGCATATGTAAAATGTGTTGCAGATTTGGTGCATGCTTATAGTTGGCAGAGAGTAGTAGTGATTTATGAAGATGATGCAAATGGTGGAGACTATGGAATGCTAGCACTGCTATCTGAGGCCCTCCAAGATGTTGGTTCAATGATTGAATACCGTTTAACTCTTCCATCACCTTCTTATCTGCCTAATCCCACAGAGTTCATTCGCGAAGAGCTGTTTAAGTTGATTAAAAATACACAATCTCGGGTATTCATTGTTCTTCAATCATCATTAGAAATGATTATTCATTTGTTCAGAGAAGCTTCACAGATAGGCCTTGTGGATAGAGAATCAGCTTGGATATTCCCAGAGAGCATAGCTAACTTGATGGACTCTATCAATAAGTCTTCCATTTCCTATATGGAAGGAGCTTTAGGAATCAAGACCTACTATTCTGAAAATAGCAGAGAGTATCAAAATTTTGAGGCTCAGTTCCGGCAATCTTTTCAGGCCAAGTATCCGAAGGAAGATAACCGCAACCCAGGATTTTATGCTCTGCAAGCGTATGATAGCATTAAGATTGTTGCACGAGCAATAGATAGAATGGCCAGTGGCAATGGTAGTGGCAGAAAGACACTACTAAAAGAAATATTGTCCAGCAATTTCCATGGATTAAGTGGACAAATTCTTTTTGAAGCAGGGCAGCTCTTGCAGAATCCTACCTTAAGGATTGTAAATGTAGATAAGAAGAGTTACAGAGAATTAGACTTTTGGACTCTAGAACGTGGGTTCATCGCTAGCCTCCCTACATTACAAGCTTCAAATAGTGCTTCTAGGAACACAGGAATTTTAAGTGGGGTTGTAATTTGGCCCGGGAAATCACTGAAAGTTCCAAAGGGCTGGAATCTGCCTACTAAACAAAATCCAATGAAAATTGGTGTCCCTGGAAGAACCTCATTTTCCAAGTTTGTGAAGATTGATTATGACGAGCATGTAAATCAATACAAATATAGTGGATTCTGCATTGAAATTTTTGAGAAGGTTTTAGGCCTTTTGGAGTATGATCTGCCATATGAGTATCATCCTATCAATGGAACCTACCCCGATCTGGTTCAACTTGTCTATAACAAGACTTATGAGGCTGTGGTTGGCGACATAACCATACTAGCAGAAAGATTGCAATATGTAGATTTTACTGTGCCATACGCAGAATCAGGATTGTCAATGATAGTTAAGGAAAAGTCCAAAGAATCGGCATGGATGTTTATGATGCCCTTCACCTGGCAAATGTGGGGGGCAACTGGTGCCATCTTGTTTTACACCATGTTAATAGTGTGGTACTTGGAGCGGGAACCCAATCCAGAGTTTCATGGCAATTGGAAAAGCCAGATCAGCATTGCTCTTACGTTTACCTTCTCCTCTCTATTCTTTGCTCATAGTGAGTATCAATCACCACCTAATTATTGCAATAACTTCAACAGAGGGGAGAAAATGTATAGCAACTTGACTCGTGTGGTGATGATATCGTGGCTGTTTCTAGTTTTGATTCTTAACTCAAGTTACACCGCTAGTCTTTCTTCAATGCTCACAGTTCAACGGCTGCAACCAAATACAACGGATATTGAGTGCCTGAAGAAGAATAACATGAAAATTGGTTGTGATGGAGACTCATTTGTTTGGACATACCTAGAGCAAGTTGAAAAATTCAAGCCAGAGAACATCGTAAACATTAAGAGTGAATACAGTTATGACGATGCATTCAGAAACAACTCAATAGCAGCTGCTATTCTCGAACTCCCTTATGAAAAAGTATACATCAGTCAATACTGCAAGGGGTACTCTGCCTCTACACCTACCATCACATTTGGAGGACTGGGATTTATGTTCCAGAAAGGCTCTCCTTTGACCAGAGATGTTTCTAAAGCTATATTGCAGCTCTTAGAACAGGGAGAATTGAAGAGGTTAGAAGAGAAATGGTTGAACCCCGCAGGCGCATGCTACAATTCGACTTCTGAGAATACAGAAAGGTTGAAGCTTGGAAGTTTCTGGGTTCTCTACGTGATTTCTGGTGCCACTTCAACCGTTTGTTTTCTAATTTCTACCATTCAGTCGATAAAATCTAGTCAAACACGCCAAGATGAGGAACAAGAACGTAATGGCAATCCAAGAGATGAGAGGCCCTGGAAAAGGGTGATTATAATAGCTAAGCAGACTTTTGGAAGGAAGTATAATAACACTAGTAAGGAACAGCAAGATGTCACTTATTGTTCTCCCAGAGGGGACTTCATCAACACCATTGACACCGTTAAGCATCAGCAGGGAATGGCTCCTCAATCACCACAAATCATAACGGTGTCTTCCGCACCAACGGTTACAAATGACAACGTTTGA 2832 0.4071 MNFPSQALARICLSYLFIYFLFIDGHQAEVTNGDSEVVSIGAIIDVNSRIGKEQRVAMNIAAQNYNNTFKSYKLALYFQEPNKEPVRPTSLAEEMIKTRKVQVIIGMHTWIEAASVAELGRQTQVPVISFAAPTITPPLMPIRWPFLVSMVNNSNAYVKCVADLVHAYSWQRVVVIYEDDANGGDYGMLALLSEALQDVGSMIEYRLTLPSPSYLPNPTEFIREELFKLIKNTQSRVFIVLQSSLEMIIHLFREASQIGLVDRESAWIFPESIANLMDSINKSSISYMEGALGIKTYYSENSREYQNFEAQFRQSFQAKYPKEDNRNPGFYALQAYDSIKIVARAIDRMASGNGSGRKTLLKEILSSNFHGLSGQILFEAGQLLQNPTLRIVNVDKKSYRELDFWTLERGFIASLPTLQASNSASRNTGILSGVVIWPGKSLKVPKGWNLPTKQNPMKIGVPGRTSFSKFVKIDYDEHVNQYKYSGFCIEIFEKVLGLLEYDLPYEYHPINGTYPDLVQLVYNKTYEAVVGDITILAERLQYVDFTVPYAESGLSMIVKEKSKESAWMFMMPFTWQMWGATGAILFYTMLIVWYLEREPNPEFHGNWKSQISIALTFTFSSLFFAHSEYQSPPNYCNNFNRGEKMYSNLTRVVMISWLFLVLILNSSYTASLSSMLTVQRLQPNTTDIECLKKNNMKIGCDGDSFVWTYLEQVEKFKPENIVNIKSEYSYDDAFRNNSIAAAILELPYEKVYISQYCKGYSASTPTITFGGLGFMFQKGSPLTRDVSKAILQLLEQGELKRLEEKWLNPAGACYNSTSENTERLKLGSFWVLYVISGATSTVCFLISTIQSIKSSQTRQDEEQERNGNPRDERPWKRVIIIAKQTFGRKYNNTSKEQQDVTYCSPRGDFINTIDTVKHQQGMAPQSPQIITVSSAPTVTNDNV* 944
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1734 943 PANTHER GLUTAMATE RECEPTOR 3.4 19 921 - -
Apr3g1734 943 SUPERFAMILY Periplasmic binding protein-like I 35 448 IPR028082 -
Apr3g1734 943 SMART GluR_14 458 809 IPR001320 GO:0015276|GO:0016020
Apr3g1734 943 CDD PBP1_GABAb_receptor_plant 39 411 IPR044440 -
Apr3g1734 943 CDD GluR_Plant 455 807 - -
Apr3g1734 943 MobiDBLite consensus disorder prediction 857 874 - -
Apr3g1734 943 PIRSF IGluLR_plant 6 940 IPR017103 -
Apr3g1734 943 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 19 921 - -
Apr3g1734 943 Gene3D - 345 459 - -
Apr3g1734 943 Pfam Ligand-gated ion channel 809 837 IPR001320 GO:0015276|GO:0016020
Apr3g1734 943 MobiDBLite consensus disorder prediction 855 874 - -
Apr3g1734 943 Gene3D - 155 327 - -
Apr3g1734 943 Gene3D - 738 814 - -
Apr3g1734 943 SUPERFAMILY Periplasmic binding protein-like II 431 807 - -
Apr3g1734 943 Gene3D - 566 721 - -
Apr3g1734 943 Pfam Bacterial extracellular solute-binding proteins, family 3 482 808 IPR001638 -
Apr3g1734 943 Gene3D - 467 565 - -
Apr3g1734 943 Pfam Receptor family ligand binding region 56 396 IPR001828 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Apr3g1734 Apr-Chr3 33064420 33068392 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1734 14 846 Ion Channels AT2G29120 32.681 3.20e-137 432
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1734 - - aprc:113859865 1887.08
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1734 3 33064420 33068392 Apr3g1734 3 33064420 33068392 ECH