Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1733 ATGGATCCTGAACCTGGTTCTCACGTTTTCGATTCATTGATGTCTTCCCCTTCCATTTTTTGGTCCAAAACTTCAAATGTTTGCCACTTCCTTCCTCCACTCATATTCTTCTTTTCCTTATTTCACGTTGGAGCTGAGGCCACCAACAATCAAAATGTCGTTGCCATAGGAGCAATCCTCAACCTTAGCTCTCGTGCTGGCAAGGAAGAGAAAGTTGCTATTGAACTTGCAGCTCGAAATTACAACGGCAGTTCAAAGTACCATAAGCTATCTCTACATTTCGACGATTCCAGAGGGATCGCCATAAGAGCATTTTCTATCGCCGAAGAGATGATTAGAATGAAGAAAGTGCAAGTGATAATTGGCGGGCTCTCATGGCAAGAGGCAGTTTTGGTAGCTGAGGTTGGAAGTCAAGCTCAAGTTCCTGTTATTTCATTTGCTGCACCAGTCACCACCCCACTGTTGTCATCATTTCATTGGCCTTTCTTAGTATTAATGGCTAACAATTCCACTGCATTTGTAAAATGTGTTGCTGATGTAGTTCATGCCTACAATTGGCAAAGAGTTACTGTGATTTATGAAGAGGATGCATATGGTAATGCTTATGGGATGCTAGCATTTCTATCTGAGGCACTGCAAAATGTTGGTTCACAGATTGAGCTCTCTTTGGCTCTTCCTCCTTATTCTTATTCTTCTGTGGCTCATCCTGGTGGAGAAGTTCAACTAGAGCTGCTGAAGCTACTCAACACTCAATCTCGTGTCTTCATAGTTCTGCAGTCATCAATACCTATGGTAACTTGTTTGTTTGCAGAAGCTCAAAAGATGGGACTTGTGGATAGGGAAACAGCTTGGATAGTTCCAGAAAGCATTACATATATGCTAGATTCTGTTGCTGACTCTGTCATTTCTTCTATGGAAGGTGTTTTGGGAATCAAGACTTATTCCTTACAAAATAGCACTGAATATCAAAGTTTCCACGTTCAGTTCAGAAAAAGCTTTCAAAAAGAAAATCCAGAAGATGACCCTAGACCTGGATTTTATGCTCTGCAAGCATATGATAGCATTGGAGTTGTTACAAGGGCCATGGAGACATTAAGAAATGATATCAGTAGTCCTAAGATATTTCTAAAAGAAATGCTGTCTTGCAATTTCCTTGGTTTGAGTGGAAAAATAGAATTTGAACATGGGCAGGCCTTGCCCTCACCTATATTTAGGATTGTAAATGTAATTGGAAAGAGTTACAAAGAAATAGACTTTTGGACAGAAGAGTATGGATTCTCCAAAACCCTTTCCTTTGAATTAGCTGGTCAGAATGCAATAGAAGGTTTGGCTGGTCCTGTAATTTGGCCTGGGAATTTAATGAGGCCTCCAAGGGGTTGGAGTATGCCTACAAGTGCAAAACCAATGAAAATTGGTGTTCCAAGAAAGACTCCATTTGAGAAGTTTGTGAAGGTAGAGAACAATGAATACTCAAATCAGACCAAGTATAGTGGATTCTGCATTGAAATTTTTCAAAAAATTATTGATCTATTGCAGTATGATCTACCATATGAAATAGTTCCCTTTAATGGAACCTATACTGATCTGGTTTTTCTTGTCTATAACAAGACTTTTGATGCCGTTGTTGGTGACTTAACCATTGTGGCTGATAGAATGCAATACGTGGATTTTACATTGCCATATGCAGAGTCAGGATTGTCAATGATAGTTCCAGCAAAATCTGAGGATACAACTCTGATTTTTATGAAGCCCTTTACTTGGGAAATGTGGATCGTTATAGTTTCTGTCTTGATCTACACCATGTTAACAGTTTGGTACTTAGAGCGGGATTCCAATCCAGAATTTAGTGGTCCATGGAAGACTCAAATCAGCATTGCTCTATGGTTTACTGTGTTTTCTCTATTCTTTGCCCACAGGGAGAAAATCTATAACAATTTCACTCGAATGGTGATTGTTGTGTGGCTCTTCCTTGGTTTGATTCTAACCTCAAGCTACACTGCTAATCTATCCTCAATGCTCACCGTTCAACAATTACAACCAAATGTTAAAAATATTGAGTCACTTAAGTGGAGCAACTCTAAAATTGGTTTCTCAGGTGATCCATTTGTGAGAAAATATTTGGAAAGCGTGCTTCATTTCAAATCACAGAATATTATCAAAGTTAGCAGGGAGTACAACTATACCGAAGAGTTCAAAAGCAAGCGTATAGCTGCTGCATTTATTGAAATCCCCTACGAAAAGGTATTCATGAGCAAGAATTGTAGAGGATATTCTGCCTTCACACCTACCAACAGATTTGGAGGACTAGGCTTTATGTTCCAGAAAGGTTCTCCAATTACCAGGGACTTTTCCAAAGGTATATTGCAGCTCTCAGAGAATGGAGACTTGAAGTCACTAGAAGATAAATGGTTGAACAACCCGGATGAGTGTTCAACCAATATAACTACCAATGCCAACGGAAGTTTGAAGCTTCAAAGCTTTTGGGTTCTTTTTGCAGTTTCTGTTTTCACTTCAACCTTTTGTGTGATAATATCCATGGTGTTGTCAATGAAAAATAATGAACAGTATCAACAAGCATTTGAAGGAGATTGTGGGTGTTCAGCTGTAGAGACTGTCTGGAAGAAGGTGCTCATTCTAGCAAACTATATATACTATACAGAAAGTAGTAAACAAAGTCAAGCCTTAAATTCAGCTCATATAGAGGGTGTAGAAGAATTCTCTTTGGAGCTCCAACAAGGCAGCACTTCTAATACATTGGATCAAAATTAA 2769 0.3908 MDPEPGSHVFDSLMSSPSIFWSKTSNVCHFLPPLIFFFSLFHVGAEATNNQNVVAIGAILNLSSRAGKEEKVAIELAARNYNGSSKYHKLSLHFDDSRGIAIRAFSIAEEMIRMKKVQVIIGGLSWQEAVLVAEVGSQAQVPVISFAAPVTTPLLSSFHWPFLVLMANNSTAFVKCVADVVHAYNWQRVTVIYEEDAYGNAYGMLAFLSEALQNVGSQIELSLALPPYSYSSVAHPGGEVQLELLKLLNTQSRVFIVLQSSIPMVTCLFAEAQKMGLVDRETAWIVPESITYMLDSVADSVISSMEGVLGIKTYSLQNSTEYQSFHVQFRKSFQKENPEDDPRPGFYALQAYDSIGVVTRAMETLRNDISSPKIFLKEMLSCNFLGLSGKIEFEHGQALPSPIFRIVNVIGKSYKEIDFWTEEYGFSKTLSFELAGQNAIEGLAGPVIWPGNLMRPPRGWSMPTSAKPMKIGVPRKTPFEKFVKVENNEYSNQTKYSGFCIEIFQKIIDLLQYDLPYEIVPFNGTYTDLVFLVYNKTFDAVVGDLTIVADRMQYVDFTLPYAESGLSMIVPAKSEDTTLIFMKPFTWEMWIVIVSVLIYTMLTVWYLERDSNPEFSGPWKTQISIALWFTVFSLFFAHREKIYNNFTRMVIVVWLFLGLILTSSYTANLSSMLTVQQLQPNVKNIESLKWSNSKIGFSGDPFVRKYLESVLHFKSQNIIKVSREYNYTEEFKSKRIAAAFIEIPYEKVFMSKNCRGYSAFTPTNRFGGLGFMFQKGSPITRDFSKGILQLSENGDLKSLEDKWLNNPDECSTNITTNANGSLKLQSFWVLFAVSVFTSTFCVIISMVLSMKNNEQYQQAFEGDCGCSAVETVWKKVLILANYIYYTESSKQSQALNSAHIEGVEEFSLELQQGSTSNTLDQN* 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1733 922 PANTHER GLUTAMATE RECEPTOR 36 912 - -
Apr3g1733 922 Gene3D - 56 400 - -
Apr3g1733 922 SUPERFAMILY Periplasmic binding protein-like II 445 806 - -
Apr3g1733 922 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 36 912 - -
Apr3g1733 922 CDD GluR_Plant 467 804 - -
Apr3g1733 922 Pfam Bacterial extracellular solute-binding proteins, family 3 490 805 IPR001638 -
Apr3g1733 922 PIRSF IGluLR_plant 25 920 IPR017103 -
Apr3g1733 922 Gene3D - 742 812 - -
Apr3g1733 922 Gene3D - 466 577 - -
Apr3g1733 922 CDD PBP1_GABAb_receptor_plant 56 430 IPR044440 -
Apr3g1733 922 Pfam Receptor family ligand binding region 73 410 IPR001828 -
Apr3g1733 922 Gene3D - 169 422 - -
Apr3g1733 922 Gene3D - 578 717 - -
Apr3g1733 922 SUPERFAMILY Periplasmic binding protein-like I 50 460 IPR028082 -
Apr3g1733 922 Pfam Ligand-gated ion channel 806 836 IPR001320 GO:0015276|GO:0016020
Apr3g1733 922 SMART GluR_14 470 806 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1733 Apr-Chr3 33057613 33062069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1733 23 903 Ion Channels AT2G29100 31.873 2.99e-143 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1733 - - aprc:113859864 1829.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1733 3 33057613 33062069 Apr3g1733 3 33057613 33062069 ECH