Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1718 ATGCTCAAAGAAACCTTCATCTTCCTTGCACTTGTTTTATTACTATACAAATATGTTCCTATTCTCTACTTGGAGATAACCTTACCCTCCCTATACACTGACTCTTGTGGACTCATATTCAATACACCCTCAAACACAGGCCTTCTAGGTCGCACCTGCAATGATCCCAGTTATGAACTTGTTTGTGAGGCTAACAAAACAGTGTTGTACTTAAACTTTGGTAGACACTTCATCCATGCCATTACCACTACACCCAATAATGCCACCCTTCAATCAATGACTGGTGGACTTGACAACAATAATTGCTCCACAGTCACTCTTGCTCTTCTCACATACACTAACTTCACCAAATATAGTTCTGAACAAGAAAGTAAACTAGCCATTGACACTAACGTATATTATAGCGATGATTTAATATTCGTTAGCTGTGAGAACCCAATTAGTTCATTTTTATACACTGATATTTCTACTCCTTGTACAACACAGAGTAAGAGGGGTTATTATTCTTACGTTTTGCTTTGGGAGGCTGAAGTATGGGATGTGTTTGAGTCATGTAGCGTTGACATGATGATAAGGATGTTACCATGGGGACCCGTGACATGCAATGAGAAGTGTTCTTATCCAGAGAACATGCAGAATGAGGTGAAGGGGATTCAAATAAAGTGGCGAGCTAACCGCTGTGGAGAGTGGGATGGTGGAGATGGCACTTCTTGCTTCTTGGATAACACAACTAACATGGTCTTCTGCAATTCCAAAGCAGGGTTTTTTTCAAGTGTTTCAAACTTTCTGACAGCGGGGATCAATGTACTCTTATGGTTTGCAGTAAAATTTGCATTGGGTCCCCCATTTGTGGTTGCATTCTTGATTTATAAATGGAAGAGGAGGGATCAATTTGTGTGTGATGAGGTTGAAGATTACCTCCAAAATCATAGTAATCTAATACCCATCAAGTACTCTTACTCTGAGATAAAGAAAATGACCAAAGGTTTCAAGCACAAGTTAGGTGAAGGAGGCTATGGCTATGTTTATAAAGGAAAGCTTAGAAGTAAGCGTGATGTTGCTGTCAAATTATTAGGCAAGTCCAAACCAGATGACCCACAATTCATAAGTGAAGTTGCTACAATTGGAAAGATTCGTCACATCAATGTGGTGCAATTACTTGGATTTTGTGCAGAACGAACTAAGAGGGCTCTTGTTTATGAGTACATGCCTAACGGTTCTCTTGACAAGCACATACTTTCACAAGAAGAAGGGAATGCATCAATAGGCTATGAGAAAATACATAATATTTCTCTAGGAGTGGCTCGCGGAATAAAATACTTACATGAAGGTTGTGACATGCAAATTCTACATTTTGATATCAAACCTCACAACATTCTTCTTGATGAGAACTTTAATCCAAAGATCTCAGACTTTGGACTAGCAAAGTTATATCCAATAGATGGTACCAATGTAACTCTATCAGTGGCAAGAGGAACAATGGGATACATGGCACCTGAATTGCTCTATAAGAACATTGGAGGGATATCATATAAGGCTGATGTTTATAGCTTTGGGATGCTATTGATGGAAATGGCAGGGAGAAGAAAGAACTTGAATGCTATGGAGTATTCTTGGCAGACTTACTTTGCTAAATGGGTTTATGATCAATTTGATGAAACCATAGATCTTAGTAATGCGACCGATGAGGAAAAAGTGATAGCAAAGAAGATGATATTAATAGCTTTACGTTGCATACAAATGAAGCCAAATGATCGTCCTTCAATGAATGAAGTAATAGAAATGCTTGAAGGAGAGTGTGATGTTAATGCCATATGA 1818 0.3861 MLKETFIFLALVLLLYKYVPILYLEITLPSLYTDSCGLIFNTPSNTGLLGRTCNDPSYELVCEANKTVLYLNFGRHFIHAITTTPNNATLQSMTGGLDNNNCSTVTLALLTYTNFTKYSSEQESKLAIDTNVYYSDDLIFVSCENPISSFLYTDISTPCTTQSKRGYYSYVLLWEAEVWDVFESCSVDMMIRMLPWGPVTCNEKCSYPENMQNEVKGIQIKWRANRCGEWDGGDGTSCFLDNTTNMVFCNSKAGFFSSVSNFLTAGINVLLWFAVKFALGPPFVVAFLIYKWKRRDQFVCDEVEDYLQNHSNLIPIKYSYSEIKKMTKGFKHKLGEGGYGYVYKGKLRSKRDVAVKLLGKSKPDDPQFISEVATIGKIRHINVVQLLGFCAERTKRALVYEYMPNGSLDKHILSQEEGNASIGYEKIHNISLGVARGIKYLHEGCDMQILHFDIKPHNILLDENFNPKISDFGLAKLYPIDGTNVTLSVARGTMGYMAPELLYKNIGGISYKADVYSFGMLLMEMAGRRKNLNAMEYSWQTYFAKWVYDQFDETIDLSNATDEEKVIAKKMILIALRCIQMKPNDRPSMNEVIEMLEGECDVNAI* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1718 605 Gene3D Transferase(Phosphotransferase) domain 1 403 603 - -
Apr3g1718 605 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Apr3g1718 605 PANTHER RUST RESISTANCE KINASE LR10-RELATED 56 600 IPR045874 GO:0004672
Apr3g1718 605 Gene3D Phosphorylase Kinase; domain 1 296 402 - -
Apr3g1718 605 SUPERFAMILY Protein kinase-like (PK-like) 309 597 IPR011009 -
Apr3g1718 605 SMART serkin_6 328 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1718 605 ProSiteProfiles Protein kinase domain profile. 328 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1718 605 Pfam Protein kinase domain 331 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1718 605 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 56 600 - -
Apr3g1718 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1718 Apr-Chr3 32883164 32885870 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1718 317 598 Receptor kinase-like Gene Family AT5G38280 51.546 5.99e-95 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Apr3g1718 Pkinase 5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1718 - - aprc:113859857 1236.48