Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1716 ATGTCTACAACCTACACCATTCTCCTCTTCTTTTCACTACTACTCTTCTCCTTTGCAAATTCTTCATCTTCAGAACCACGCCGTGTCCTCCACCAACCACTCTTCCCAAGAATATCGCTTCCTCCAACGCAACCACCAACATCTTCTCCTCAACCACAACCCAAACAACAACAACCAAAGCTTCCATTTGCATCATCATCGTCGTCGTCGTCGCCATCACTCTCTTCACCTCCACACAAGTCATTCTTCCCTTCCTACCATTCTCCACCACTCCCTCCATCCCCAACTGTCCTCGCCACATTCCCCGCCAACATCTCCTCCCTTCTCCTCCCCCGCCCCTACACCCGCCACCACGGCCCTGCCGCCGCCGCCATCGCCCTCGCCGTCTCCCTCTCTCTACTCATTCTCTCCCTCGTCGTTGCTGCCGCCGCCTTCCTCCACCGCCGCCGCCGCAGACATCCCCTCCCCTCCGCCGCTGACAACGACGACGACAAGGCCTCTAGATCAGACAACCTCCGCTTGTTCCCTCCCAACACCGCCACCTCCGATGGCGCCGACCGGAAACCCCGCGTCAAGTCGAGCCCAACGTCGGAGCTACTCTACCTCGGCACGGTGGCGGGTTCGGAGAACACAACAGCAAAAGTTTCAAACTCGAGTTGCAGCAACAATGGCGGTTTTCGGCCACCTGAAAACAAAATTGACGAAAGGAAGAAAGAAGAGGAAGAAGATAAAGAAAAAGAAGAAGAAGAAGACGAAGAGGAACAGTTTTTTTCTCCAAGAGGATCTTCTGGGCACAAGCAACAGAGTCCTCCTTCACCTTCTGCTCTTGCCTCTTCAAGTGCTCACGTTTTCCACGTCGATAAATTCGGTAGCAGAAGCTTCACCTCTAGAACCCCTTCTTACCCTCGTTCTAACTCTCTCTCTTGTTCCCCTTCTCTCAATGTCAGCCCCACAAGCACCAAATCGTTACCCCATCATAACCCCACTTCTTCTTTCTCTTCTTCCTCTTCTTCTCCCAAACCCAGAGAAGAATGGGATGTTTCAGCTCAGGGGAACAATTATTTGCCACCTCCTCCTCCGCCTCCGCCTCCGCCGCCGCGGTATTGGGAGGCTTCGGTGGTGGGTGGATTGGGTGAAGGTGTTGGTGTTAGGAGTGGGAATGAGGAGACACCGAAGCCGAAGTTGAAAGCTTTACACTGGGATAAAGTTAAGGCCAGCTCGGACAGGGTCATGGTTTGGGATCGCTTGAGACCAAGTTCTTTTCAGTTGAACGAGGACATGATTGAGACACTTTTTATGGTGAATAATTCAAAGGAAAGTTCTTGTCTTGCTGCTCCTAGAGACAGTGCTCGCCGTCAAGTAATTCATTCCACATCTTTAATGCCACCGGAAAATAGGGTGCTTGACCCTAAGAAGTCTCAGAACATTGCCATTTTGCTTAGGGCACTAAATGTGACTATTGACGAAGTTTGTGAAGCCCTCAGGGAAGGCAATTGTGATACACTGGGAACAGAACTTCTAGAAAGTTTACTAAAGATGGCTCCAACCAAAGATGAAGAATGTAAGCTGAAGAAGTTTCAGGACGAATCGCCCTTCAAGCTTGGCCCAGCTGAGAAATTTCTTAAAGTCGTGCTAGATATACCTTTTGCATTTAAGAGAGTGGATGCCATGCTCTACATTGCTAATTTTGATTCAGAATTAGAATACCTTAGGAAGTCCTTTGAAACTCTGGAGGTGGCTTGTGAGGAATTAAGGAATAGCAGAATGTTTTTGAAGATACTTGAAGCCGTGCTGAGAACAGGAAATCGAATGAATGTTGGCACTAATCGCGGTGATGCACATGCATTCAAACTGGACACACTTTTGAAGTTAGTTGATATCAAAGGAACAGATGGAAAGACTACACTCCTGCATTTCGTTGTACAGGAAATTGTCAGGACTGAGGGTTCTCATATTTCCGGTTCTAATAACCATCATACCTCTGAAAATGTCAACCAATTTACTCTTCAAGATGAAGTTGACTTTAGGAAGCTTGGACTGCAAGTTGTTTCGGGCTTGAGCGGGGAGCTCACCAATGTTAAAAAAGCTGCTGCTATGGATTCTGATATGCTCACCAGTGATGTTGCTAAACTTGCCAGAGGAATTGAGAAAGTTGTGCAAGTTGTGAAATTGAATGAGGAATCACCTTTGAAAGAAACTAACCAAAAATTTTCTGAGGCAATGAAAGGTTTCTTGGAGAGGGGAGAGCAAGAGATTTCTGAAGTCCAAGGCCAAGGGAAAAATGCTCTCTCTTCAGTAAAGGAGATAACTGAGTATTTCCATGGAAATTCAGCAAAGGAAGAGGCCCATCCATTTAGAATTTTTATGGTTGTGAGGGATTTCCTTTCAATACTAGATGGTGTTTGCAAAGAAGTTGGTAAAGTAAATGAGAGAACTTTGGTTGGTTCCCGTCAATATGTAATGCCTACGAATCCCGTACCACCAACCTTTTTCCCTGAGATTGTTACTAAGCATCCATCTGATTCCTCTGAATCTGATTAA 2541 0.4707 MSTTYTILLFFSLLLFSFANSSSSEPRRVLHQPLFPRISLPPTQPPTSSPQPQPKQQQPKLPFASSSSSSSPSLSSPPHKSFFPSYHSPPLPPSPTVLATFPANISSLLLPRPYTRHHGPAAAAIALAVSLSLLILSLVVAAAAFLHRRRRRHPLPSAADNDDDKASRSDNLRLFPPNTATSDGADRKPRVKSSPTSELLYLGTVAGSENTTAKVSNSSCSNNGGFRPPENKIDERKKEEEEDKEKEEEEDEEEQFFSPRGSSGHKQQSPPSPSALASSSAHVFHVDKFGSRSFTSRTPSYPRSNSLSCSPSLNVSPTSTKSLPHHNPTSSFSSSSSSPKPREEWDVSAQGNNYLPPPPPPPPPPPRYWEASVVGGLGEGVGVRSGNEETPKPKLKALHWDKVKASSDRVMVWDRLRPSSFQLNEDMIETLFMVNNSKESSCLAAPRDSARRQVIHSTSLMPPENRVLDPKKSQNIAILLRALNVTIDEVCEALREGNCDTLGTELLESLLKMAPTKDEECKLKKFQDESPFKLGPAEKFLKVVLDIPFAFKRVDAMLYIANFDSELEYLRKSFETLEVACEELRNSRMFLKILEAVLRTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIVRTEGSHISGSNNHHTSENVNQFTLQDEVDFRKLGLQVVSGLSGELTNVKKAAAMDSDMLTSDVAKLARGIEKVVQVVKLNEESPLKETNQKFSEAMKGFLERGEQEISEVQGQGKNALSSVKEITEYFHGNSAKEEAHPFRIFMVVRDFLSILDGVCKEVGKVNERTLVGSRQYVMPTNPVPPTFFPEIVTKHPSDSSESD* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1716 846 Coils Coil 230 255 - -
Apr3g1716 846 MobiDBLite consensus disorder prediction 154 198 - -
Apr3g1716 846 ProSiteProfiles Formin homology-2 (FH2) domain profile. 385 824 IPR015425 -
Apr3g1716 846 MobiDBLite consensus disorder prediction 353 369 - -
Apr3g1716 846 PANTHER FORMIN-RELATED 9 844 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Apr3g1716 846 Gene3D Formin, FH2 domain 391 818 IPR042201 -
Apr3g1716 846 MobiDBLite consensus disorder prediction 36 87 - -
Apr3g1716 846 MobiDBLite consensus disorder prediction 292 343 - -
Apr3g1716 846 MobiDBLite consensus disorder prediction 212 226 - -
Apr3g1716 846 SUPERFAMILY Formin homology 2 domain (FH2 domain) 356 811 - -
Apr3g1716 846 MobiDBLite consensus disorder prediction 212 280 - -
Apr3g1716 846 MobiDBLite consensus disorder prediction 260 279 - -
Apr3g1716 846 MobiDBLite consensus disorder prediction 58 82 - -
Apr3g1716 846 Pfam Formin Homology 2 Domain 387 798 IPR015425 -
Apr3g1716 846 PANTHER FORMIN-LIKE PROTEIN 2 9 844 - -
Apr3g1716 846 SMART it6_source 385 813 IPR015425 -
Apr3g1716 846 MobiDBLite consensus disorder prediction 38 57 - -
Apr3g1716 846 MobiDBLite consensus disorder prediction 155 170 - -
Apr3g1716 846 MobiDBLite consensus disorder prediction 229 243 - -
Apr3g1716 846 MobiDBLite consensus disorder prediction 292 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1716 Apr-Chr3 32872779 32876782 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1716 98 846 FH2 protein (formin) Gene Family AT2G43800 47.246 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1716 - - gmx:100786203 1085.86