Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1714 ATGGAAGGAGGAGCTGCTCCGCCACCTGACACCGTCATGTCGGACGCAGCGCCGCCGCCGCCGCAGGACCCACAGCAGCAGCAACAGCCGGTGACGATGGGGATCGAGAATATTCCGGCGACACTGAGCCACGGTGGCAGGTTTATCCAATACAACATATTCGGTAACATATTCGAAGTTACCGCTAAATACAAACCACCCATCATGCCTATCGGTAAAGGCGCGTACGGCATCGTCTGCTCCGCTTTGAATTCGGAGACGAATGAGCATGTTGCCATCAAGAAGATTGCCAATGCGTTTGACAACAAAATTGATGCCAAGAGGACCCTCCGTGAAATCAAGCTGCTTCGCCACATGGATCATGAAAACGTGGTCGCAATCAGGGATATAGTGCCACCACCTCAAAGAGAGGTATTCAATGATGTTTACATTGCATATGAGCTAATGGACACTGACCTACACCAAATCATTCGTTCAAATCAAGCATTATCAGAGGAGCACTGTCAGTATTTTCTGTATCAAATCCTCCGTGGGTTGAAGTACATACATTCTGCAAATGTTCTGCACAGGGACTTAAAGCCTAGCAACCTTCTCCTGAATGCCAACTGTGACTTGAAAATTTGTGATTTTGGATTGGCTCGTGTCACCTCTGAAACTGATTTTATGACTGAATATGTTGTTACAAGATGGTACCGTGCACCAGAGCTTCTGTTAAACTCTTCTGATTACACAGCAGCAATTGATGTATGGTCTGTTGGTTGTATTTTCATGGAACTGATGGATCGAAAGCCTCTGTTTCCTGGCAGAGATCATGTGCATCAGTTGCGTCTACTTATGGAGCTGATCGGCACCCCTTCCGAAGCTGATTTGGGGTTTCTGAATGAAAATGCTAAGAGATACATTAGGCAACTGCCTCTTTACCGCCGTCAATCTTTCCAAGAAAAGTTTCCGCGTGTCAATGCTGAAGCTATAGATCTTGTTGAAAAAATGTTAACTTTTGACCCTAGACAAAGGATTACTGTTGAAGATGCATTAGCACACCCCTACTTAACATCTCTGCATGACATCAGTGATGAGCCAGTGTGCATGACTCCCTTCAACTTTGACTTCGAACAACATGCTTTGACTGAGGAACAGATGAAAGAACTGATATACCGAGAGGCTCTAGCATTTAATCCCGAGTATCAGCAGTAG 1194 0.4564 MEGGAAPPPDTVMSDAAPPPPQDPQQQQQPVTMGIENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIVPPPQREVFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEADLGFLNENAKRYIRQLPLYRRQSFQEKFPRVNAEAIDLVEKMLTFDPRQRITVEDALAHPYLTSLHDISDEPVCMTPFNFDFEQHALTEEQMKELIYREALAFNPEYQQ* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1714 397 ProSitePatterns Protein kinases ATP-binding region signature. 71 95 IPR017441 GO:0005524
Apr3g1714 397 Pfam Protein kinase domain 70 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1714 397 SMART serkin_6 65 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1714 397 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 22 395 - -
Apr3g1714 397 CDD STKc_TEY_MAPK 58 393 - -
Apr3g1714 397 Gene3D Phosphorylase Kinase; domain 1 48 387 - -
Apr3g1714 397 MobiDBLite consensus disorder prediction 1 30 - -
Apr3g1714 397 Gene3D Transferase(Phosphotransferase) domain 1 149 377 - -
Apr3g1714 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Apr3g1714 397 SUPERFAMILY Protein kinase-like (PK-like) 70 358 IPR011009 -
Apr3g1714 397 ProSitePatterns MAP kinase signature. 100 203 IPR003527 GO:0004707|GO:0005524|GO:0006468
Apr3g1714 397 MobiDBLite consensus disorder prediction 12 26 - -
Apr3g1714 397 ProSiteProfiles Protein kinase domain profile. 65 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g1714 397 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 22 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1714 Apr-Chr3 32852648 32857874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1714 1 397 MAP Kinase Gene Family AT2G43790 86.935 0.0 690
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Apr3g1714 Pkinase 2.2e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1714 K14512 - gmx:547616 750.74